| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1075 |
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| Symbol | |
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| ID | 8413948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1216906 |
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| End bp | 1218147 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022664 |
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| Product | hypothetical protein |
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| Protein accession | YP_003180094 |
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| Protein GI | 257784877 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3883] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.855575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAA AGAAACAGCA AAGCACGACC ATCGAGGAGC AGAGTGCTGC TCTTTTTAAT
CGTCGTGATG CTCTTAAGAT TTTTGCCGGC ATGGGCATTG CTGCCGCTGC CGTTACTGCC
TCACTGATTA ACACGCGCCC TGCTCTTGGT GTTACACAGT CTCAGATTGA TGCTGCTCGT
AGTGACTACG ATGCTGCTCA GAAGCTGCTT GATGAGATTT CTAACGAAGT TTCTAATATG
CAGGCAAGTC TGAATGACAC CAACTCTCAG ATTGGTGCTA TTTCTGGTCA GATTGCAGAT
AAGCAGAATC AAATTGATGC TAAACAGAAA GAGATTTCTG AAAAAGAAAC TCAGATTACC
GAGAAGAGAA AAGCACTTGG CGCACGTATG TCCAGCAACT ATAAAGCTGG CCCAGCTGGC
GCTTTAGAGA TGATTCTTTC TTCTGCAAGC TTTGAGGAGC TTACTTCTAA TATTTACTAT
CTCGATAAGA TTTCTGAGTC TGATCAGAAG ATGATTGAGG AAGTTAAGAA CTTGAAGGCT
GCCCTTGAGT CAGATAAGGC TGCTCTTCAG TCCGAGAAGA CTGAGCTTGA GAATAAGAAG
ACTGAACTTG AAAATCTTCG TACTTCTCAG GAGTCTCAGC TCAATGAGAT TTCTGCTCGT
CAGGCAGACG CTGCAAACGT TGTTTCTAAT CTTGATGACA ACGTTAAAGA GCTTATTGCT
CAGCGTGATT CTGAGCTTCT TGCTGCCCAG CAGGAGGCAG AGCGTGTTGC TGCTCAACGT
GCTGCTGCGT CAAGTAATAG TGGCGGCGGT AGCAGCTATT CTGGCGGTGG TGGCGGAGGA
GGAACCTCTT CTGCTGGTTC TGGCTCTGCT GCTGCAGTTG TTAATGCTGC AAGTTATACC
GGATCTACAG GCGCAGGTTT CTGTGCTGCT TGGGTTTCTA ATGTCTTCTC AAACGCAGGC
GTTGGCACCT TCTATGGCAA TGCATGCGAT ATGTATTACT CCTGGTGTTA CTCTACCGAC
CAGAGCGCTA TTGAGCCTGG CATGATTATT GCTGTTCCTA CTCTTGGTGG CTCTGCTGCA
GCTTTGATTT ACGGTCACGT TGGTATCTAC ATTGGTGGCG GCATGGTCAG ACACTGCCTC
TCTGGTGTTG TAAGAAGCCA GAGCTTAAGC TCTTGGATTT CTCAACTTGG TGCTTTGAGT
ACTCCAAGGT GGGGCTGGCT TGGTGGCGTT GTTCTGAGCT AA
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| Protein sequence | MSLKKQQSTT IEEQSAALFN RRDALKIFAG MGIAAAAVTA SLINTRPALG VTQSQIDAAR
SDYDAAQKLL DEISNEVSNM QASLNDTNSQ IGAISGQIAD KQNQIDAKQK EISEKETQIT
EKRKALGARM SSNYKAGPAG ALEMILSSAS FEELTSNIYY LDKISESDQK MIEEVKNLKA
ALESDKAALQ SEKTELENKK TELENLRTSQ ESQLNEISAR QADAANVVSN LDDNVKELIA
QRDSELLAAQ QEAERVAAQR AAASSNSGGG SSYSGGGGGG GTSSAGSGSA AAVVNAASYT
GSTGAGFCAA WVSNVFSNAG VGTFYGNACD MYYSWCYSTD QSAIEPGMII AVPTLGGSAA
ALIYGHVGIY IGGGMVRHCL SGVVRSQSLS SWISQLGALS TPRWGWLGGV VLS
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