| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1051 |
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| Symbol | |
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| ID | 8413924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1192345 |
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| End bp | 1194357 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022640 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_003180070 |
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| Protein GI | 257784853 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGT TAAATGCATC GTTAGCAGTG AGTGACCAGG ATGCATACTT GTTTGCGCAA
GGAACATGGT TTCAGAGCCA TAAAAAACTA GGTGCGCACC CTGCGGTCCA AGAAGATGGA
ATTGAGGGCT ATCATTTTGC TGTTTGGGCA CCCAATGCAG TTTCTGTTTC TGTTGTTGGA
GACTTTAATA ATTGGGATGA TACCGTCAAC GTTCTATCTC GCTCAAAACA CGGTGGAATC
TGGGAAGGTT TTGTTCCAGG AATAACCTCA GAAGTATTGT ATAAATTTCT GATTGTATCC
ACATCTGGCG AGAAGATTTT CAAGGCTGAC CCGTATGCTA CCTATGCAGA GGTTAGACCA
CATACGGCAT CTATTACGTT TGACCCGGAT GTGTACGTTT GGGAAGACGA TGTATGGATG
AAGAAACGTG CAACGCTTAA GTTTCTACAT AGTCCTCTCA ACATTTTTGA AGTTCACCTT
GGTAGCTGGA AGCAGCATAC TGACTCGTCT GCTCAAGAAG ATTCTGCTAA TGCAGAGACT
ACTGAAAAGA TTGAAGAACC TAAAGATTAT TTTGATACAA ACGTAGACGC GTTCTACACC
TATGATGACC TGTCAAAAGA GTTGGTAGCT TACGTTAAAG AGATGGGCTA CACCCATATT
GAGCTTCTCC CCGTTATGGA GCACCCCTTT GATGGATCCT GGGGCTATCA GGTAACTGGC
TATTTTGCTC CCACCTCAAG GTATGGTAAT CCTGCTCAGT TCAAGCACTT TATTGACTCC
TGCCATCAGG CTGGTATCGG CGTCATTTTA GACTGGGTTC CAGGAGGTTT CTGCAAAGAT
GCTCATGGTC TTGCAGAGTT TGATGGCACC AAACTTTTTG AAGAAAAAGA GCATCCTAAC
TGGGGAACTC TTAAGTTTGA CCTTACTCGT GGTGAGGTTA GAAGCTTCCT TGTTTCTAAC
CTGCTTATGT GGTTGAAGGA TTATCACGCT GATGGCATTC GTGTTGACGG TGTCAGTAGC
ATGTTGTATT TGAATTTTGG CATCGATGAC CCTTCTCAGA AGCGCTTTAA TTGCAAGGGT
ACTGAGGAAG ATTTGGATGC AAGCGCTTTC TTGCGTCTCT GCAATGAGAC CGCTCAAAAG
CAGTATCCTG ATATTTTGAT GATTGCAGAA GAGTCCACGG CATGGCCGCT GGTTACCTAT
CCTCCAGATG TTGGGGGACT TGGTTTCAAC CTTAAGTGGG ACATGGGTTG GATGAACGAT
ACGTTGCACT ATTGTCAGAC TGATTTTCCT TATAGACCAG GCAATCATCG ACTTTTAACC
TTCTCCAGCA TGTATCAGTT CAATGAGAAC TTTGTGCTGC CACTGAGCCA TGATGAAGTT
GTTCATGGTA AGTGCAGCCT TATTCAGCGT ATGCCAGGAG ATTGGTGGAG ACAGTTTGCT
GGTATGAGAG CTCTAGCGCT CCATCAGATG ACCCATCCAG GTGCTAAGCT CAACTTTATG
GGCAACGAGA TTGCACAGTT TATTGAGTGG CGCTATTACG AGGGCATTGA GTATTACTTG
ACTGAGGAGT ATCCAACTCA TGCTCACCAG CAGGCATATA TTAAGGCTCT TAATCATTTC
TATAAGAATC ATCCAGGACT TTGGCAGTAC GCCTATGACA ACCGTGGATT TGATTGGATT
GATGCAGATA ATAATGAGCA ATCAATCATT TCGTTTGTTC GCCATGGAAG AAAGCCTTCC
GAGGACCTGG TTATTCTCAT CAATTTTGAC GTTGCAACCC ATCAGAACTT CCGTTTAGGT
ATGCCTTCTG AAGGTGTGTG GAAAGAAGTA TTTAATTCCG ACGCAAAAGA GTTTGGCGGT
TCGGGTGTTG TGAATAGTAA GAAACTTTCC ACTAAACCAG TGGCATGGAA TGGAAGAGAT
TATTCGGTAG AACTGTCTGT TCCTCCGCTT GGTGGCATTG TTTTAGCGTT TGAGAAAGAA
CTTCCAAAGA GGGGGAAGCA TGGCCGTAAA TAA
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| Protein sequence | MAELNASLAV SDQDAYLFAQ GTWFQSHKKL GAHPAVQEDG IEGYHFAVWA PNAVSVSVVG
DFNNWDDTVN VLSRSKHGGI WEGFVPGITS EVLYKFLIVS TSGEKIFKAD PYATYAEVRP
HTASITFDPD VYVWEDDVWM KKRATLKFLH SPLNIFEVHL GSWKQHTDSS AQEDSANAET
TEKIEEPKDY FDTNVDAFYT YDDLSKELVA YVKEMGYTHI ELLPVMEHPF DGSWGYQVTG
YFAPTSRYGN PAQFKHFIDS CHQAGIGVIL DWVPGGFCKD AHGLAEFDGT KLFEEKEHPN
WGTLKFDLTR GEVRSFLVSN LLMWLKDYHA DGIRVDGVSS MLYLNFGIDD PSQKRFNCKG
TEEDLDASAF LRLCNETAQK QYPDILMIAE ESTAWPLVTY PPDVGGLGFN LKWDMGWMND
TLHYCQTDFP YRPGNHRLLT FSSMYQFNEN FVLPLSHDEV VHGKCSLIQR MPGDWWRQFA
GMRALALHQM THPGAKLNFM GNEIAQFIEW RYYEGIEYYL TEEYPTHAHQ QAYIKALNHF
YKNHPGLWQY AYDNRGFDWI DADNNEQSII SFVRHGRKPS EDLVILINFD VATHQNFRLG
MPSEGVWKEV FNSDAKEFGG SGVVNSKKLS TKPVAWNGRD YSVELSVPPL GGIVLAFEKE
LPKRGKHGRK
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