| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1033 |
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| Symbol | |
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| ID | 8413906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1164610 |
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| End bp | 1165428 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 645022622 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003180052 |
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| Protein GI | 257784835 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTCAGT TTTTTCAATT TGCACGAAAT AGTATTTTTA TGCGGAGTTT GCTCAAATGG
GAGCCTTTCT ATTATGTATC AATGCAGTTA CGCAATCGCT TTCTTTACAA ATATGGGATC
ACTTTAGTCG ATGACGCTTT CGTACTGTTT TTCATTAGTG GTATAGCTGC ATCTATTCTG
TTTGGCATTC TATTTGAGTC TGTAATCGGT GTACTTTGCG GTCTTTTCTC GTTATTTCTA
GTTCCTTATT TTCTATATGA ACATGCTAAG CATCAGTCTG CTTTAGAAAT AGCTCATATG
ATGCCTTCGA TTTTTAGGAC TATTGCTGTT GCTCTTGGAT CAGGTCTTAC GCTTTCGCAA
TCTATTGAAT ATGTTAGTAA ACATACAGAA GGTGTTGTAT CGGAAAGTTT TTGTATTGCT
GATATGCAAA TTAAGTGCGG CTTTCCTATT GAAGAGGCTA TTGAAGATTT GGCAGAGAGA
TTGGATGCTC CAGGTGTTAA TTTGCTGGCT AGCGCCTTAG TAATTTCACA TCGAACAGGC
TCTCCGCTTA AGAATCTTTT ACAAAAAACT GCTGAGTTGG TTGAATTACA AGAGAAGAAT
CAAAGACTTA TAGCAACAAA GACTGCTCAA GTTAGATTAT CTGCTCGAAT TGTATGTCTT
CTTCCAGTTG TTCTGTTGAT CATTTTGTCA CTAGTATCGC CAGACTTTCA AAAGGGCTTA
TTTACGCCAT CAGGTGTTAT ATGCACGGTA ATTGCAATGA TCATGGACTG TATTGCTCTT
TTGATTATTC GAAGCATTAT GAAAGGAGTA ATGAAGTGA
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| Protein sequence | MVQFFQFARN SIFMRSLLKW EPFYYVSMQL RNRFLYKYGI TLVDDAFVLF FISGIAASIL
FGILFESVIG VLCGLFSLFL VPYFLYEHAK HQSALEIAHM MPSIFRTIAV ALGSGLTLSQ
SIEYVSKHTE GVVSESFCIA DMQIKCGFPI EEAIEDLAER LDAPGVNLLA SALVISHRTG
SPLKNLLQKT AELVELQEKN QRLIATKTAQ VRLSARIVCL LPVVLLIILS LVSPDFQKGL
FTPSGVICTV IAMIMDCIAL LIIRSIMKGV MK
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