| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1023 |
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| Symbol | |
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| ID | 8413896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1157517 |
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| End bp | 1159499 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022613 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_003180043 |
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| Protein GI | 257784826 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4907] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAA TCTCGCTTCG CTCTTCTAAA ATGAGCCAGT TTGTAAGGAT TGCACTTTGC
ATAATGCTGT TGGCTGTTGC GTTTCTAATT GCTCCAACAA AAGCATTTGC ACGTGATCTT
TCAATAGATA GGGTAGATAT TGATGCGACG GTTCAAAAAG ACGGAACGTT GCATGTTGTA
GAAACTCGTA CATTTTATTT TAAAGGAAGC TATCACGGTG TTTATTGGAA TCTTCCAGTT
GGAAAGAATA AATACAATGG ACAGAACGTT GAAATAAATA TCACTTCAGT TACTGTTCAA
GATAGTCAAG GATCACGCCA GATTTATAGT AAAAACTCTA GTGGAAACAG CGCCAACTCA
GATGAGTATT ATGTTCCTAC TCAATCAAGC GATATGTTGA ATTTGAAAAT TTATTCAGCA
CATGATGATG AATCTGCAAA TATAACTATC GAGTATGACA TTACTAATGT TGTAACAAAT
TGGTCTGATA CTGCAGAGTT GTATTGGAAG TTTGTATCTG ATGGTTGGGA TTCAGAGTCT
CATAATGTAA CAGCTACCAT CCATCTTCCG GTTCCTTCAG GTCAATCGAT CGTTGCTGGA
GATACTGTCC GTGCTTGGGG ACACGGCCCG CTGGATGCAA ACGTAGAAAT TACTAAGAAT
GCAGTTGTTT ACAAAGTTCC TGGTGTAGGA ACTGACGAGT TCGCGGAAGC TCGTATTACG
TTCCCAACAG ATTGGGTTTC TGGGCTAGCT CCTATTCAGC AGAATAAATT AAGCAGCATT
CTATCTGAGG AACAAGCATG GGCAGACGAA GCAAATCACA AGCGTGAGCT TGCAAAAATT
CAGGTAGCCC TCATACTTTA TGCGCCGTTA GTATTTGCAG CTATCACCTT TGTGGCAGCT
ATTCTGCTAC GCATTAAATA TAAAAAGGTC ATGGCTCCTC AGTTTAATGA CCTTTATTAC
AGGGACGTTC CATCTAATGA TCATCCAGCA GTTCTTTCTA TGCTTTATAA CGGTGAGGGA
ATTAAGGGAG ATGCTCTGAC GGCAACTCTT ATGCACCTTT CTGATGCAAA GTACATTAGT
TTGAATAAGA CAGTTAATAC AAACTTCCTT GGTATGGAAA AGTCTGATTA TTGTCTTACA
AAGGTCCAAG ACTTTCAGGA AGACCAGCCA TCTTTCTATC CTGGTAGTTC TTTATCAAAT
AAGATTGATA GCATGGCTAT GCGATTGATT TTCGATAAGG CCGGGGAATC TGGAGCGGTA
AATACTACCG TTACTATGAA ACAAATTGGC AAATATGCCT CTGATCATCC AGAAGATTTT
AATAAGGCGT ATGAGTCATG GGAGAGCCCT ATTAAGTTTA GCTATGCTGC TAAGTTTGAA
ACAAATAAGA TCCCATTCCA TGGCAAGGGA ATTCTTGGTG CTCTGATTGC TGTTGATATT
CTTGTTGCAG CTGCTGCATT CTTTATGGGT ATTGTGGCGG ATGTTTCGAT TGGTAATTTA
CTCTTTAATT TACTGCTTCT TGTTATTGCC GGTCTTATTG CGCTTATAAA CATTGGTAAG
TTTGATTTGA TGAACAGAGA GGGTGTTGAG ACGCTTGCTA AGACCCGTGC TCTAAGAAAG
TGGCTTACTG AATTTACTAA TCTTCATGAG GCAATTCCAA CCGACGTTAT TCTTTGGAAT
AGGCTTTTAG TTATGGCAGT CGCGCTTGGT GTGGCAGATA AGGTTATTAG TCAGTTGAAA
GTTGCAATGC CCGAGTTGCT TAAGGATCCA CAGTTTATGC CCGTTTATAG TTGGTATTAC
TATGGAAATG GCATGCGTGT TAATGCAATC GATAGCGTAA CCAAGAGTGT TACAGCTGCT
CATTCTGTCT CTACCGCGGC ACTTGCTTCT TCTAGTTCAA GCTCTGGTGG CGGATTTGGT
GGCGGCTTCT CCGGCGGAGG CGGCGGTGGC TTCGGCGGCG GAGGCGGCGG AGGCGGTTTT
TAA
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| Protein sequence | MYKISLRSSK MSQFVRIALC IMLLAVAFLI APTKAFARDL SIDRVDIDAT VQKDGTLHVV
ETRTFYFKGS YHGVYWNLPV GKNKYNGQNV EINITSVTVQ DSQGSRQIYS KNSSGNSANS
DEYYVPTQSS DMLNLKIYSA HDDESANITI EYDITNVVTN WSDTAELYWK FVSDGWDSES
HNVTATIHLP VPSGQSIVAG DTVRAWGHGP LDANVEITKN AVVYKVPGVG TDEFAEARIT
FPTDWVSGLA PIQQNKLSSI LSEEQAWADE ANHKRELAKI QVALILYAPL VFAAITFVAA
ILLRIKYKKV MAPQFNDLYY RDVPSNDHPA VLSMLYNGEG IKGDALTATL MHLSDAKYIS
LNKTVNTNFL GMEKSDYCLT KVQDFQEDQP SFYPGSSLSN KIDSMAMRLI FDKAGESGAV
NTTVTMKQIG KYASDHPEDF NKAYESWESP IKFSYAAKFE TNKIPFHGKG ILGALIAVDI
LVAAAAFFMG IVADVSIGNL LFNLLLLVIA GLIALINIGK FDLMNREGVE TLAKTRALRK
WLTEFTNLHE AIPTDVILWN RLLVMAVALG VADKVISQLK VAMPELLKDP QFMPVYSWYY
YGNGMRVNAI DSVTKSVTAA HSVSTAALAS SSSSSGGGFG GGFSGGGGGG FGGGGGGGGF
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