| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1009 |
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| Symbol | |
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| ID | 8413881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1139799 |
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| End bp | 1141010 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022598 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_003180029 |
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| Protein GI | 257784812 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTTCAG TAGAAGAACA GCTCCGTGTT ATTACTTCTG GAACTATGCA GATTGTTCCT
TTGGATGGTT TAAAAGAAAA ACTCAAGAAA GGCACCCCTC TTAACATCAA ACTTGGCGTT
GATCCAACAA GCCCTGATTT GCACTTGGGC CATGCGGTTC CTCTGCGCAA GATGCGCCAG
TTTCAGGACC TTGGCCATAA TGTTACTTTA ATTATCGGTA GTGGTACTGC ACTGATTGGT
GACCCTTCTG GTCGTGATTC TACTCGCCCT CCTTTAACTG CAGAGCAGGT AGATGCCAAT
GCAGAGACCT ACGTTAATCA GGCAATGAAG ATTCTTGATC CAGAAAGAAC TACTGTTGTT
CACAACGGTG ACTGGATTAA GCCAATGAAT TTGGAAACCA TGCTTGGTCT TATGAGCAAA
TTCACCATTG CTCGCATTCT TGAGCGAGAA GACTTTTCTA ATCGCTATCA CAACCAGCAG
CCAATCGCAC TTCATGAGTT TATTTACCCT GTTCTTCAGG CATACGATTC TGTTGTTATT
AAGGCAGATG TAGAGATGGG TGGAAACGAC CAAATCTTTA ACCTACTTGC CGGTCGAGAT
CTTATGCGTG ATATGGACAT GGAACCTCAG ATTGCTTTGA CTATGCCTCT GCTTGTAGGT
ACTGACGGTA CTAAGAAGAT GAGTAAGTCT TACGGTAACT ACATCGGTCT GACTGATGAG
CCAAATGATA TGTTCGGCAA GGTCATGTCT ATCACTGACG AGATTATTCC AATGTATTAT
CGTCTTTGTT CCACACTTTC CATTGACGAG CTTGATGCAA TTGATAAGAG CTTTGAGGAT
GGCACTGCTG ATCCTTACCA GCTTAAGCGC GCTCTTGGTA GAAATATTGT TGATCTTTAC
CATGGTGAGG GAGAAGGCCT TAAGGCACAG GCATCTTTTG ATGCTCAGTT CAAAAACAAT
GAGGTTCCTG ACGATGTCAA AGAGTTTGCA ATTACCCTTG AGGCAGATGA AGATGGACTT
ATATACTTAC CAAAGATTTT AGTTGAGGCA GGAATTGCTT CAAGTAACGG CGAAGCACGT
CGTCTCATTG ATGGTTGCGG CATTAAGATT AATCAGAAAC CAATAGCAGC AAAGACGTAT
AAGGTTGAGC CATCGGTTCT TGAGGGAGCT CTTCTTCAGG CAGGCAAGAA GCGTTGGGCT
AAGCTTATCT AG
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| Protein sequence | MLSVEEQLRV ITSGTMQIVP LDGLKEKLKK GTPLNIKLGV DPTSPDLHLG HAVPLRKMRQ
FQDLGHNVTL IIGSGTALIG DPSGRDSTRP PLTAEQVDAN AETYVNQAMK ILDPERTTVV
HNGDWIKPMN LETMLGLMSK FTIARILERE DFSNRYHNQQ PIALHEFIYP VLQAYDSVVI
KADVEMGGND QIFNLLAGRD LMRDMDMEPQ IALTMPLLVG TDGTKKMSKS YGNYIGLTDE
PNDMFGKVMS ITDEIIPMYY RLCSTLSIDE LDAIDKSFED GTADPYQLKR ALGRNIVDLY
HGEGEGLKAQ ASFDAQFKNN EVPDDVKEFA ITLEADEDGL IYLPKILVEA GIASSNGEAR
RLIDGCGIKI NQKPIAAKTY KVEPSVLEGA LLQAGKKRWA KLI
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