| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1005 |
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| Symbol | |
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| ID | 8413877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1134640 |
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| End bp | 1135707 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022594 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_003180025 |
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| Protein GI | 257784808 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.610294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGACCT ATTTAGTAAC TGGTGGAGCT GGATTTATTG GATCTAACTT TATCCACTAT
ATGCTCAAAA GAAATCAGGA CATTCATATC TTGAATGTGG ATGCTCTGAC TTATGCGGGC
AACCTTGAGA ATCTTTCGGA ATATGATCAA GACCCTCGCT ACACCTTTGC TCACGTAGAC
ATTAGGGATA AAGAGGCTCT GACACAGCTG TTTGAGGCTC ATCATCCCGA TTATGTCATC
AACTTTGCTG CAGAGAGCCA CGTAGATCGC TCCATTGAAG ATCCAGGCGC CTTCGCCGAT
ACCAATGTCA TGGGTACTGT TGCTCTTTTG AGTGTTGCAG AGTCTTTCTG GAATGATGGT
CAGGGTTCTT ACGGAGACCA TAAGTATCTG CAGGTTTCTA CTGATGAGGT CTATGGCTCA
CTGTCACTTG ATGATCCAAA AGCATTTTTC CGTGAGACCA CATCTTTGAG TCCACACAGC
CCCTACTCTG CATCTAAGGC TTCTGCAGAT ATGTTTGTAA AAGCCTGGCA TGACACGTAC
GGATTTCCTG CGGTAATCAC GCGTTGCTCC AACAACTATG GCCCTTACCA GTTCCCCGAG
AAGCTCATTC CTCTGATGAT TGAGAATTGC TTAGAACATA AGTCTCTTCC TGTCTATGGT
GATGGACTCA ACGTTCGAGA TTGGCTCTAC GTTGATGATC ACTGTAAGGC AATTGCTATG
GTTCTTGAGG GCGGCAGACT GGGTGAGGTT TACAACATTG GTGGTCATAA CGAGCGCAAT
AACCTTTACA TTGTTAAGCG CATCATCAGT GAAGTTGCAA GAATCACTGG GGACACTCAG
ATTACTGAGG ATCTGATTTC TTACGTTACT GACCGCAAGG GTCATGACCG CCGTTACGGC
ATTGCACCTG ATAAGATTAA AGAAGAGTTG GGCTGGTATC CAGAAACTCC ATTTGAAGAG
GGAATTGTTA CCACTATCAA CTGGTATCTA GAGAACCGTA AGTGGGTTAA GAATGTAGTT
TCTGGTGATT ACCAGGATTA CTACAAGAAG ATGTATGAAG GTCGATAA
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| Protein sequence | MKTYLVTGGA GFIGSNFIHY MLKRNQDIHI LNVDALTYAG NLENLSEYDQ DPRYTFAHVD
IRDKEALTQL FEAHHPDYVI NFAAESHVDR SIEDPGAFAD TNVMGTVALL SVAESFWNDG
QGSYGDHKYL QVSTDEVYGS LSLDDPKAFF RETTSLSPHS PYSASKASAD MFVKAWHDTY
GFPAVITRCS NNYGPYQFPE KLIPLMIENC LEHKSLPVYG DGLNVRDWLY VDDHCKAIAM
VLEGGRLGEV YNIGGHNERN NLYIVKRIIS EVARITGDTQ ITEDLISYVT DRKGHDRRYG
IAPDKIKEEL GWYPETPFEE GIVTTINWYL ENRKWVKNVV SGDYQDYYKK MYEGR
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