| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1000 |
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| Symbol | |
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| ID | 8413872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1128957 |
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| End bp | 1129880 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022589 |
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| Product | LicD family protein |
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| Protein accession | YP_003180020 |
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| Protein GI | 257784803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3475] LPS biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTCTG ACGGATTTAA GACATACGAG AACCCCGATG AACTGAGAAG AATTCAGATT
CTTTCCACAC TTTTGATGGA TGAGCTTGAT CGCGTCTGTA CAGAACTTGG TATTTCGTAT
CAAGCATATG GCGGAACAGC CATTGGAGCT GTCAGACATA AAGGGTTTAT CCCTTGGGAT
GATGATGTAG ATATCTCAAT GTTTCGCGAG GATTATGAAA TCTTTTTGGA GAAGGCGCCA
GCGCTTCTTC GTCCAGATTT TTGTATTCAA AACGGAAGAA AAAACAATTT CTTTCCGGCG
GTCAATACAA ACCTCTCTTT AAAGGGAACG ATCTGTGTCC CTGATGAGTT TATGACCTGC
CCTTTTACCT ATGCTATTTC AATTGGAATT TTTCCTTTCG ATAAAATTCC AGCAGATCCA
AAGAAGCTTG CTAAAGTTAA GCGGCAAACA TGGTTCTGGG GTCGCTTGAA TTTCTTACTG
GTTACACCAA CTCCTCGTGT TCCCTTGACT GGATGGAAAA AGAAAGTTGC TCTTGCAGGG
TGCTTTGTCA TTCATCACGG TTTGAAGCTT TTTAGAGTTT CATCTGCGTT TATTCAACGT
AAGTGGGACG AGGCTGCTCG CACTGCAGAG GACGAGAATA CCAATCACTA TGCAAGTTTC
GTCGAACCTG ATCCAGAGAA CTGGTCAATG GACAAAGAAG ATGTTTTTCC TATGGTTCGC
GTTCCTTTTG AAGACATTAC TACTATGCTT CCTAAGGAAT ATGACAAGCT TTTAACCAGA
GGATATGGCA ATTACATGCA GCTTCCTCCA GAGAAGGATC GTAAGAATCA TCATCCTGGT
GCGCTTGATT TTGGTAAGTG GAAAGACGTA GATGTTACCA AAGGAAGTCG TCAGGCATTC
GAGGACTTTG GTCAGAAAAG CTAA
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| Protein sequence | MESDGFKTYE NPDELRRIQI LSTLLMDELD RVCTELGISY QAYGGTAIGA VRHKGFIPWD
DDVDISMFRE DYEIFLEKAP ALLRPDFCIQ NGRKNNFFPA VNTNLSLKGT ICVPDEFMTC
PFTYAISIGI FPFDKIPADP KKLAKVKRQT WFWGRLNFLL VTPTPRVPLT GWKKKVALAG
CFVIHHGLKL FRVSSAFIQR KWDEAARTAE DENTNHYASF VEPDPENWSM DKEDVFPMVR
VPFEDITTML PKEYDKLLTR GYGNYMQLPP EKDRKNHHPG ALDFGKWKDV DVTKGSRQAF
EDFGQKS
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