| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0985 |
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| Symbol | |
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| ID | 8413857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1112203 |
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| End bp | 1112952 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022574 |
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| Product | amidophosphoribosyltransferase-like protein |
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| Protein accession | YP_003180005 |
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| Protein GI | 257784788 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTATCTA CATCTATCTT TACGGCAACA GCAAACTCAA CACTTGAGCT GCTTGCTCCT
ACACGCTGTG TCGTGTGCGA GAAACCCGGT CAGCTTCTTT GTGATGAGTG TCAGTCAAAG
TTACCGTGGA TTACTCAGCG GTGGGCATGT CCTAATTGTG GTGCACCGTA TGGGAAGCTT
GTCTGCTCAG AGTGCATGGA TAAAAAGAAA CGTCCCGTTC AGTGGGAGAG CAGGGCAGTC
ATTTGTGCTA TGGGGTTCAA AGGTCCTCCT GCACGGCTGA TTCTGACGCT TAAGGACGGC
TATGAGCTTC GGCTAGCTCC CATAATTGCT GCAGCTATTT TATGTTCGCT TGAAGAAGCT
TCAGCATGGC GCGCACGTGA TGGCACTTCT CGCTTTGATA GTTCAAAAAT TGATGGCGTT
TCATTTATTC CAGCAACTGC GGAAGCATAT GCGCGCAGAG GTTTTGATCA TATGGAACTT
GTAGCGCAAT CGTTTTGCAA GCTTACAGGC TTGCCCTTGT ATGACGTGCT TATACGACCT
CATGCAAAAG ACCAAAGACT GCTCACATCC GCTCAAAGAC AAATAAATTT GAAAGGAAGT
ATTGCTTGTA CTGCGCCAGT TAATCAATCA AATATTTTAC TTTTGGATGA TGTAGTAACT
ACCGGAGCAT CAATTAGGGA AGCTACAAGA GTGCTTTGTG CCGCAGGCGT ACATTCTGTA
ACCGTAGGCG CATTAGCTCG TGTATGGTGA
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| Protein sequence | MLSTSIFTAT ANSTLELLAP TRCVVCEKPG QLLCDECQSK LPWITQRWAC PNCGAPYGKL
VCSECMDKKK RPVQWESRAV ICAMGFKGPP ARLILTLKDG YELRLAPIIA AAILCSLEEA
SAWRARDGTS RFDSSKIDGV SFIPATAEAY ARRGFDHMEL VAQSFCKLTG LPLYDVLIRP
HAKDQRLLTS AQRQINLKGS IACTAPVNQS NILLLDDVVT TGASIREATR VLCAAGVHSV
TVGALARVW
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