Gene Apar_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0969 
Symbol 
ID8413840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1093628 
End bp1094143 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content42% 
IMG OID645022557 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003179989 
Protein GI257784772 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000635233 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTT CTCAAAAAGA AATAAAATCC GTTGTAGCCG CTAGCACTTT TACTAGCGGC 
TCTTCTGCGC TCGGCAACTC CCAAGAAATC CCCGAGCTTC TCCTTAAAAA TCAGCTCTGC
TTCCCGCTCT ACAGCGCCTC AAAAGAAGTA GTACGCAGAT ATACACCGCT ACTTAAGCCC
TTTAATCTGA CATACACGCA ATACATCACC ATGATGGCGC TCTGGGAGAA TAAATCCTTA
GATGTCAAAG CTTTAGGTGA ACTTTTATTC CTTGATTCAG GAACCTTAAC CCCGCTGCTC
AAAAAGCTCG AAGAAAAAGG ACTTGTCTTA CGTCAAAAAA CAAACAAAGA CGGACGTCAG
CTGATTGTTT CTCTTACCCA AAAAGGTAAA GACCTTAAGC AAGAAATACA AATAGTTCCA
CATCAAATTG GCTCATGTGT TGATCTCTCA CCCGAAGAAG GCGCTGAGCT CAAACGATTA
CTTTTAAAAG TTCTTTCTAA CGTTACAGAA AGCTAA
 
Protein sequence
MSSSQKEIKS VVAASTFTSG SSALGNSQEI PELLLKNQLC FPLYSASKEV VRRYTPLLKP 
FNLTYTQYIT MMALWENKSL DVKALGELLF LDSGTLTPLL KKLEEKGLVL RQKTNKDGRQ
LIVSLTQKGK DLKQEIQIVP HQIGSCVDLS PEEGAELKRL LLKVLSNVTE S