Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0969 |
Symbol | |
ID | 8413840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 1093628 |
End bp | 1094143 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645022557 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003179989 |
Protein GI | 257784772 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000635233 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCTT CTCAAAAAGA AATAAAATCC GTTGTAGCCG CTAGCACTTT TACTAGCGGC TCTTCTGCGC TCGGCAACTC CCAAGAAATC CCCGAGCTTC TCCTTAAAAA TCAGCTCTGC TTCCCGCTCT ACAGCGCCTC AAAAGAAGTA GTACGCAGAT ATACACCGCT ACTTAAGCCC TTTAATCTGA CATACACGCA ATACATCACC ATGATGGCGC TCTGGGAGAA TAAATCCTTA GATGTCAAAG CTTTAGGTGA ACTTTTATTC CTTGATTCAG GAACCTTAAC CCCGCTGCTC AAAAAGCTCG AAGAAAAAGG ACTTGTCTTA CGTCAAAAAA CAAACAAAGA CGGACGTCAG CTGATTGTTT CTCTTACCCA AAAAGGTAAA GACCTTAAGC AAGAAATACA AATAGTTCCA CATCAAATTG GCTCATGTGT TGATCTCTCA CCCGAAGAAG GCGCTGAGCT CAAACGATTA CTTTTAAAAG TTCTTTCTAA CGTTACAGAA AGCTAA
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Protein sequence | MSSSQKEIKS VVAASTFTSG SSALGNSQEI PELLLKNQLC FPLYSASKEV VRRYTPLLKP FNLTYTQYIT MMALWENKSL DVKALGELLF LDSGTLTPLL KKLEEKGLVL RQKTNKDGRQ LIVSLTQKGK DLKQEIQIVP HQIGSCVDLS PEEGAELKRL LLKVLSNVTE S
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