| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0968 |
|---|
| Symbol | |
|---|
| ID | 8413839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 1093052 |
|---|
| End bp | 1093606 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 645022556 |
|---|
| Product | Glutathione peroxidase |
|---|
| Protein accession | YP_003179988 |
|---|
| Protein GI | 257784771 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000061106 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA CCAACATCTA TGACCTCTCT GTAGAAGAGC GCGACGGATC TCTTACTTCC
CTCTCATCTT TTGACGGAAA AGTTCTTCTG ATTGTCAACA CTGCAACTGG CTGCGGTTTT
ACCCCACAGT ATGAAGATCT TGAACGAATT TACGCTACTT ATAAAGATCA AGGCTTTGAG
ATTTTGGACT TCCCTTGTAA TCAGTTTGCA GGCCAGGCTC CAGAGTCCGA TGAAGAAATT
CACCAGTTCT GCACTATGAA GTTTGGTACC AATTTTCCAC AGTTCAAGAA AAGTGATGTC
AACGGAGAGA CCGCAAATCC TCTCTTTGAG CGTCTTGCAA CAGCTTTTCC TTTCCAGGGC
TTTGGTAAGG GCATCAAGGC ACTTGCACTG GACAAATTTG CAAAAGCAAA CAACAAAAAG
TTTGGCAACA AAGCCTACAT CATGTGGAAC TTCACCAAGT TCCTTGTAGA CCGCCAAGGA
AACGTTGTTG CCCGCTTTGA GCCAACCGCC GATATGGCAG AGGTTGAGAC CGCAATTAAA
AACCTTCTTG CATAA
|
|---|
| Protein sequence | MANTNIYDLS VEERDGSLTS LSSFDGKVLL IVNTATGCGF TPQYEDLERI YATYKDQGFE
ILDFPCNQFA GQAPESDEEI HQFCTMKFGT NFPQFKKSDV NGETANPLFE RLATAFPFQG
FGKGIKALAL DKFAKANNKK FGNKAYIMWN FTKFLVDRQG NVVARFEPTA DMAEVETAIK
NLLA
|
|---|
| |