| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0899 |
|---|
| Symbol | |
|---|
| ID | 8413765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 1007215 |
|---|
| End bp | 1008573 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 645022482 |
|---|
| Product | Bleomycin hydrolase |
|---|
| Protein accession | YP_003179919 |
|---|
| Protein GI | 257784702 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3579] Aminopeptidase C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.326798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGA TGAAGAGCAT TTCCTTCGAC GACATTGCGG CAGCTCAGAA GAACTTTGAG
TCTGACCGCG CTCACACAGT AGCTAAGAAT GCTGCTACAA GCGCGGGTGT TAGAAAAGCA
GCCCGTGTAC CAGAAGGCGT TGCCCTCAAT CCTCTTACCT TTGATGTTGA GGTAAAACAG
GGCGACCGTA CTAATCAGAA GCGCTCTGGC CGTTGTTGGA TGTTTGCTTC ACTCAATACC
TTTAGATATC GCATCATCAA AAAATACAAC CTGTCTACTT TTGAGCTTTC TCAGGCATAT
CCTCTGTTCT GGGACAAAAT GGAGAAGTCC AATTGGTTCC TTGAGAACAT TTTAGATACT
CTTAATGAGC CTCTGAATGG TCGTCTTGTA TCCTTCCTGC TTACTGATCC AATCGGCGAT
GGTGGCCAGT GGGATATGTT TAAGAGCCTT GTTAAGAAGT ACGGCGTTGT ACCAAAGAGC
GCTATGCCAG AGACAGAATG CTCCAGCAAT ACACATGAAA TGGACACATA CCTCACACGT
TACCTTCGTA GTGCTGCAAA GCGTCTTCGT GAGACTGCGG CGGCTGGCGA GTCCCTTGAA
TCTCTGCGTG AGATGAAGAA AGAGATGATG GAGGACGTCT ACACCTTACT AGTAACCTGC
CTAGGTCAGC CTCCAGTATC TTTTGAGGCA CGCCTGCGCG ATAAGGACGA CAACCTTGTT
CTTTCTGGCA CCTTTACTCC TCAGGAGTTC TTCGCTGAGA CTGTTGACAT GAATCTTGAT
GATTACATTT CAATCATCTC TGCCCCTACC GCCGACAAGC CTTTCAACCA CACCTACACT
GTTTCCCGTT TGGGCAACGT TGTTGAGGGC GGCGGTGTTC GCTACCTCAA CCTTGAGATC
CCTGAGCTCA AGCGCCTTGC AGTAGCTCAA CTCAAAGACA ACTTACCTGT CTGGTTTGGC
TGCGATGTTG CTCAGTCTTA CCTTCGTGAA GAAGGCATTA TGGACACTCG TGCGCTTGAC
GTTGATGGCC TCTTTGGTTT CCCTGTTGAG GGAGCTCTTA ATCGCGCCGA GCGTCTTGAC
TACGGCGAGT CTCTCATGAC TCACGCTATG GTTCTTGAGG GCGTTAACTT TGACACTCTT
GGCAACACAA CCCTCTGGAA GGTTGAGAAC AGCTGGGGTA AAGACCACGG TCGCGATGGC
TTTGATACCA TCTCTGACCC TTGGTTTGAC GAGTACGTCT ACCAGATTGT TGTTGACAAG
AAGTACCTCA CCCCTGAGCA GCTCAAGATA TTTGAGACCG AAGAAGCAAC TGTCCTCGAA
CCATGGGACC CAATGGGCTC TCTTGCAACT CTTCGCTAA
|
|---|
| Protein sequence | MDQMKSISFD DIAAAQKNFE SDRAHTVAKN AATSAGVRKA ARVPEGVALN PLTFDVEVKQ
GDRTNQKRSG RCWMFASLNT FRYRIIKKYN LSTFELSQAY PLFWDKMEKS NWFLENILDT
LNEPLNGRLV SFLLTDPIGD GGQWDMFKSL VKKYGVVPKS AMPETECSSN THEMDTYLTR
YLRSAAKRLR ETAAAGESLE SLREMKKEMM EDVYTLLVTC LGQPPVSFEA RLRDKDDNLV
LSGTFTPQEF FAETVDMNLD DYISIISAPT ADKPFNHTYT VSRLGNVVEG GGVRYLNLEI
PELKRLAVAQ LKDNLPVWFG CDVAQSYLRE EGIMDTRALD VDGLFGFPVE GALNRAERLD
YGESLMTHAM VLEGVNFDTL GNTTLWKVEN SWGKDHGRDG FDTISDPWFD EYVYQIVVDK
KYLTPEQLKI FETEEATVLE PWDPMGSLAT LR
|
|---|
| |