| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0893 |
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| Symbol | |
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| ID | 8413759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 998396 |
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| End bp | 999463 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022476 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_003179913 |
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| Protein GI | 257784696 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0248566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.109317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGAAG CAGATGCAGA TAATCTTTTT GAGTCATCGT CTACTCCAGC TCCATTTCCA
GGACACACTT CTCAGCGCGT AGTTTCTAGT GGGCTTCAGG CGGAAGATCT TGAACAAGAT
AGAAACTTAC GTCCAAAAAC ACTTGATGAG TATCTTGGTC AGGAGCGCGT TAAATCCAAT
CTGCGCGTTC TGATTGAAGC GGCAAAAAGT CGTAATGAAC CTCTTGATCA TGTTATTTTT
TCTGGTCCTC CAGGCCTTGG TAAAACAACC CTTGCTGGCG TTTTAGCAGG AGAGATGGGT
TCAAAGCTTC ATACAACTTC TGGTCCTGCA ATTGAGCGAG CAGGAGATTT AGCGGCAATT
CTCACTAATC TTGAAGAAGG AGATATCCTC TTTGTAGATG AGATTCATAG GCTTAATCAT
CAGGTTGAAG AAATTCTGTA TCCAGCAATG GAAGATTTTT TCTTAGACAT TGTTATTGGC
AAAGGTCCTG CAGCAAGGTC CATTAGACTT GATATCCCGC GCTTCACACT CGTAGCAGCA
ACAACAAGAA CAGGACTTCT AACTGGTCCT TTGCGTGATC GTTTTGGTAT CTCATATCGT
CTTGATTACT ACACTGTCTC TGAGCTTCAA ACTATTGTTA TGCGCTCAGC AAATATTCTT
GATGTTGAAG TAGATGAGCA GGGAGCTGCT GAAATTGCTT CTCGATCAAG AGGTACACCG
CGTTTGGCAA ATCGTTTATT AAAACGTGTG CGAGATTACG CACAAGTTAA AGCTGAAGGT
ACTATTACCT GGCAGGTAGC CTCAGAGGCA CTTTCATTTT TTGAGATTGA TGAGCTTGGC
TTAGATGTAA TGGATGTACG TGTTTTGCGT GCACTTTGCG AGACATTTAG AGGTCGTCCA
GTGGGACTAA CAACCATTGC AAGTGCAGTT TCAGAGGATC CTTCTACACT TGAAGATGTT
TACGAACCAT ACCTCTTACA ACAAGGGCTT ATTATTAGAA CTCCTCAGGG TAGACAGGCA
ACGCATGCTG CATTTGATCA CTTACGTATT CCTGTTCCTG CTAACTAG
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| Protein sequence | MWEADADNLF ESSSTPAPFP GHTSQRVVSS GLQAEDLEQD RNLRPKTLDE YLGQERVKSN
LRVLIEAAKS RNEPLDHVIF SGPPGLGKTT LAGVLAGEMG SKLHTTSGPA IERAGDLAAI
LTNLEEGDIL FVDEIHRLNH QVEEILYPAM EDFFLDIVIG KGPAARSIRL DIPRFTLVAA
TTRTGLLTGP LRDRFGISYR LDYYTVSELQ TIVMRSANIL DVEVDEQGAA EIASRSRGTP
RLANRLLKRV RDYAQVKAEG TITWQVASEA LSFFEIDELG LDVMDVRVLR ALCETFRGRP
VGLTTIASAV SEDPSTLEDV YEPYLLQQGL IIRTPQGRQA THAAFDHLRI PVPAN
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