| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0867 |
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| Symbol | |
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| ID | 8413733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 961947 |
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| End bp | 962867 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022450 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_003179887 |
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| Protein GI | 257784670 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.049042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.204791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAG TCTTTATGGG AACTCCAGAT TTTGCTGTTC CGTCGCTCAA AAAACTTGCT
CATGACCACC AGGTTGCTTT GGTTATTACA AGGCCAGATG CTGTTCGTGG TCGTGGGAAG
ACGCTTGAGC CATCTCCTGT AAAAAAATGC GCACAAGAAC TTGATCTGCC CGTTCTTGAG
GCAAATCGTA TGACTTCAGA AGTAATTTCT GCAATGCGTG AAGCACAACC AGAAGCGCTC
TGCGTAGTTG CTTTTGGCTG CATTTTGCCA GATGAAGTTA TCTCTCTTGC GCCTTACGGT
GCTCTGAACG TGCACGCATC ACTGCTGCCT CGCTGGCGTG GAGCTGCTCC AATTCAGCGG
GCCATTCTTG CGGGTGATGT GGTTGCTGGC GTTTCCATCA TGAAGATTGC GCACGAACTT
GACGCAGGAG ATTGGTGCAA GCAAGCATCG TGTGAGATTG GTTCAAAAAA TACCGAGCAA
CTTACTGATA CATTGGCACA TCTGGGTGCT GATGCTTTGT CTGAGGCTCT CTCTGAACTC
AAAGATGGCT TTCTTGAGTG GCAGGAACAA GATGAGCGAG AAGTAACGTT TGCTCCTAAA
GTTACTAAGC AAGAAATGAA GCTTACTCCA GAAGATTCTG CTCGAGTTAA TGTACTGAGG
GTCCAGGCTT CTTCTGATGC TGCTCCTGCT CGCGTATCCG TTGGAGGCAG GTCTCTTCGC
ATATTGAGTG CCCAGCTTGC TCCAAGCGAT GTTTCTGTCG CTCAAGGTTC TGTTGCCGTT
CAAGATCACA GACTGTTCCT TGGCTGTGCT GAAGGTTCCA TAGAGCTTCT TGAGGTACGC
CCAGATGGTA AGCGTTCTAT GGATGCCCAA TCATTTGCCG CAGGACTTCA GAAGTCCCAG
ATGACCTGGC AGAAGCTGTA A
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| Protein sequence | MRVVFMGTPD FAVPSLKKLA HDHQVALVIT RPDAVRGRGK TLEPSPVKKC AQELDLPVLE
ANRMTSEVIS AMREAQPEAL CVVAFGCILP DEVISLAPYG ALNVHASLLP RWRGAAPIQR
AILAGDVVAG VSIMKIAHEL DAGDWCKQAS CEIGSKNTEQ LTDTLAHLGA DALSEALSEL
KDGFLEWQEQ DEREVTFAPK VTKQEMKLTP EDSARVNVLR VQASSDAAPA RVSVGGRSLR
ILSAQLAPSD VSVAQGSVAV QDHRLFLGCA EGSIELLEVR PDGKRSMDAQ SFAAGLQKSQ
MTWQKL
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