| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0860 |
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| Symbol | |
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| ID | 8413726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 953964 |
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| End bp | 956156 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022443 |
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| Product | helicase domain protein |
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| Protein accession | YP_003179880 |
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| Protein GI | 257784663 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.313479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGT CCAAGGTAAG CATCGCTCCT GCATCAGAGC GAGTAGCACA CACATGCTCG
CTTGTTGATA GCGTAACTAG GTTAAGGTAT GTCAATGCAA ATCGTGCCGA GGCGCTTGAG
CGTCTCGGCA TTCTGCGCGT TCGAGATCTT TTGCTCAACG TGCCTCACCG CTACCTCGAC
TTTTCTCATC GCGTACAGAT TGCCTTTGCA CAAATTGGCG AAGACGCTAC CATTACGGGT
CGTGTTGCTT CGGTAAAAAC CAAGCGTCCA CGCCCTAAGA TGGTCATTGT TGAGATTGAG
GTTGTGGATG ACACTGGCGC GCTCACAGCT TCGTTTTTCA GACAGCCCTG GGTGGCTGAA
CAAATTCACG TTGATGATGA AGTGGCGCTT AGCGGCAAGG TGCTCTTTGC GTATGGCTTC
CGTCAGATGA AGTCACCGTT TTACGAGGTG TTGAGCACAG CTAAGTCTGA TTCGGCTGAT
GAGGTTTGTT CTAAAGAGAT TCCTTCAAAG GCAGTAATTC TTCCCGTTCA TCCAGCTACT
GAGGGTGTAA GTCCTGCATG GATGCGACGC ATTATGTCGG CAGCTCTGGC GGACACGGGA
AGCGTGTGCG ACTGGTTTCC CTCAGAGCTT GTCTCCAAAC ATCACCTTAT GTCTCTTTCA
TCGGCACTTC GTGAGGTTCA TTTTCCTTCA AGTATGGAGG CAGCTGAACA AGCCCGACGC
CGTCTTGCTT TTGATGAGCT CCTTAGCTTG CAGCTCGCTC TTTTGACGAG AAGAAACTTA
GAACTTGCAG GTCATAAGCC GTTTGAACAT GTTATAGATG GGCCTAAGGT TCAGGCTCTG
ATTGAGGCTT TACCCTTTAC GTTAACTGAT GAGCAAAATC AAGCAGTTCA AGAGATTCTT
TCAGATATGG CTGCTCCACA TATTATGAAT CGCCTGCTTC TGGGTGATGT TGGTACCGGT
AAAACAGCTG TTGCTGCCGT TGCCTTAGCT GCTGTGGCAG ATTCATCAGC TCAGGCTGCC
GTGATGGCTC CTACTTCGGT TCTTGCTCAG CAGTACGCTC AAAAGATTGG TCCTTTGCTT
TCATCTGCTG GAATTATGTG GGCTCTTATT ACAGGCGCTA CCTCTGAAGA AGAAAGGCAG
CAGATTGAGC TCTGCCTGGC CGACGGTTCT TTGTCCGTTG TCTTTGGTAC CACCGCACTT
CTTTCTGAGC GCGTGGTGTT TAAGCAGCTC ACACTTGCCG TTGTTGACGA ACAGCATCGT
TTTGGCGTTG ATCAAAGAAC GGCTTTGCGT AAAAAAGGAC AAGGTGTAGA TCTTCTCGCC
ATGAGCGCAA CGCCTATCCC ACGTACGTTG GCACTTTCTT TGTACGGAGA TGTTGATACG
TCTCGTATTA CCAAGAGACC AAGGGCAGGA GCGGGGGTTA CTACCAAGCT ATGCGTACCA
GAGAATCTTG ATCAAGCGTA TGCCGCTGTT GCTGAGGCTG TTCAAGCGGG TCATCAGGCG
TATCTAGTTT GTCCTTTGAT TGACTCAAAT GATTCTGAAG AAGAGCTTGA AGATATTCCT
GAGGCCGCCC GCACAAACGG CAAGCTCTAC AGTGCGACTC GTGTATATGA GGAGCTTTCA
CAGACAGTCT TTAAAGACTT TACCTGTGAT CTTTTGACTG GTAGATTGCC TGAAGCTCAA
AAAGATCAGA TAATGGAAAA ATTCCGAGCA AACAAGACGC AAATTCTGGT CTCCACAACC
GTCATTGAAG TTGGCGTTGA TGTTCCTAAC GCTACCGTTA TGATTGTTTT TAACGCTGAC
CGCTTTGGTT TAGCCACGCT TCATCAGCTT AGAGGTCGTG TCGGTCGAGG AGACTTCCCA
GGAACTGTGT ATCTTGCCAG CAATGCCAAG CGAGGCTCTA CCGCAAGAAA GCGCCTTGCT
GCTCTTGAGC AAACTTCTGA TGGTGCACAC CTGGCAGAGC TTGACCTTGA GCTAAGGCAC
GAGGGAGAAA CCTTGGGATA TCGCCAATCA GGCGGCACTA CGCTTAAGAT CTCCGATCTC
TATGCAGATG CAGATCTTAT TGAGGCGGCT CACAAAGACG CTCTGGCAAT TACTACACAA
GACCCAAATC TAACAAGTGA TGCATATGTT ACTTTGGGAA TTGAGGCAAA AGACCGCTTT
GGTATTTATT TTGAAGAGCT TGGCTATAAG TAA
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| Protein sequence | MSESKVSIAP ASERVAHTCS LVDSVTRLRY VNANRAEALE RLGILRVRDL LLNVPHRYLD
FSHRVQIAFA QIGEDATITG RVASVKTKRP RPKMVIVEIE VVDDTGALTA SFFRQPWVAE
QIHVDDEVAL SGKVLFAYGF RQMKSPFYEV LSTAKSDSAD EVCSKEIPSK AVILPVHPAT
EGVSPAWMRR IMSAALADTG SVCDWFPSEL VSKHHLMSLS SALREVHFPS SMEAAEQARR
RLAFDELLSL QLALLTRRNL ELAGHKPFEH VIDGPKVQAL IEALPFTLTD EQNQAVQEIL
SDMAAPHIMN RLLLGDVGTG KTAVAAVALA AVADSSAQAA VMAPTSVLAQ QYAQKIGPLL
SSAGIMWALI TGATSEEERQ QIELCLADGS LSVVFGTTAL LSERVVFKQL TLAVVDEQHR
FGVDQRTALR KKGQGVDLLA MSATPIPRTL ALSLYGDVDT SRITKRPRAG AGVTTKLCVP
ENLDQAYAAV AEAVQAGHQA YLVCPLIDSN DSEEELEDIP EAARTNGKLY SATRVYEELS
QTVFKDFTCD LLTGRLPEAQ KDQIMEKFRA NKTQILVSTT VIEVGVDVPN ATVMIVFNAD
RFGLATLHQL RGRVGRGDFP GTVYLASNAK RGSTARKRLA ALEQTSDGAH LAELDLELRH
EGETLGYRQS GGTTLKISDL YADADLIEAA HKDALAITTQ DPNLTSDAYV TLGIEAKDRF
GIYFEELGYK
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