Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0859 |
Symbol | |
ID | 8413725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 953335 |
End bp | 953913 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645022442 |
Product | methyltransferase |
Protein accession | YP_003179879 |
Protein GI | 257784662 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATTA TTGGCGGAAA ATGGAAAGGT CGTGTAATTG AGGCTCCTGA TGGTAAAGGG ATTACACGAC CAACCACTGA TCGTACGCGC GAGGCTATTG CAAGCTCCAT CTTGGCTTCT CGTGGTCTTG ATATCAGTGA GTCCAGAGTG CTTGACGCTT TTGCGGGTTC GGGTGCTATG GGTTTTGAGT TGCTTTCCAG AGGAGCGTTG TATGCCACCT TTGTTGATAA AGACAGAAAG ACGTGTGATC GTATCAAACG TACAGCAAAA TCTCTTGGTG TAGCTAATTC TGAGATGAGT GTTATTTGTG GTGATACAGC GCGCTTAGCT GAATCATCTC AGCTGTTTGG AGCTCCTTTT GATGTGGTGA TTTTGGACCC TCCCTACGCC GTTGAGGTAG AGGTAGTGTC CAAGCTGCTC AAAGATTTAA TTCAGTCGGA AAGTCTGACA AATGATGCTG TAGTAGTGTA TGAGCATAGT TATAAAACTG ATTCAGTTTC TCTTGATGAT TTTGAGCTTT CTAAGAGTAA GCGTTATGGT ATTGCTCAAG TTGATGTACT TGTTCGTTGT GAGGGATAG
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Protein sequence | MRIIGGKWKG RVIEAPDGKG ITRPTTDRTR EAIASSILAS RGLDISESRV LDAFAGSGAM GFELLSRGAL YATFVDKDRK TCDRIKRTAK SLGVANSEMS VICGDTARLA ESSQLFGAPF DVVILDPPYA VEVEVVSKLL KDLIQSESLT NDAVVVYEHS YKTDSVSLDD FELSKSKRYG IAQVDVLVRC EG
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