| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0852 |
|---|
| Symbol | |
|---|
| ID | 8413718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 949096 |
|---|
| End bp | 949827 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 645022435 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_003179872 |
|---|
| Protein GI | 257784655 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTGC ACGAACGAGT AGCTGCTGCA GAAGCTATTT GCGGTCATAC ATTTATTAAT
AAGGATCTTA TCGAGGCTGC CCTCACACAC CCTTCGGCGG TGGAGGGCAA GCCCGTTTCT
GCTTCGTATG AGCGCCTTGA GTTTTTAGGG GACTCAATTC TTGGCGCTAT TATCGCAACA
GAGTTATTTG AGCGCTATCC TGATATGGAT GAAGGTCAGC TTACTCGGCT AAAAATTTCT
CTTGTGTCTG GCCATACGCT CTCTATTGTT TCTGACACTT TGGGAGTTTC TCCTTTAATT
GTTATGGGAA TTTCCGAGAA GGGCACTGGA AAGCGCGGCA TGAAGTCTGC TTTGGAGAAC
GTCTATGAGT CCATTGTTGG TGCGCTCTAC CTTGATGCGG GTTTTGAACC AACGCGCGAT
TTTGTTATTC GTACGCTTGG ACCTCACATT TCTCCAACGC TGGCAGTTCG TTCAGTAAGT
CCTAAATCTC GTTTGCAGGA AGCGGTACAG GCTCAGGGCA AGGCTACTCC TGAGTACAAG
CTTATTGGTG AGAGTGGTCC TGCCCATACA CCAACATTTA CCGCTGTGGT ATTTGTCGAC
GGCCTTAAGG TGGGTCGTGG ACAGGGACCA TCAAAGAAAG CCGCAGAGTC AGAAGCTGCT
CAAGATGCGC TGGTGCGTCT TGGTGTGGAC GATGCTCCGC TTGATGCTGA TGCAGAAATG
CACTTAAGGT AG
|
|---|
| Protein sequence | MKLHERVAAA EAICGHTFIN KDLIEAALTH PSAVEGKPVS ASYERLEFLG DSILGAIIAT
ELFERYPDMD EGQLTRLKIS LVSGHTLSIV SDTLGVSPLI VMGISEKGTG KRGMKSALEN
VYESIVGALY LDAGFEPTRD FVIRTLGPHI SPTLAVRSVS PKSRLQEAVQ AQGKATPEYK
LIGESGPAHT PTFTAVVFVD GLKVGRGQGP SKKAAESEAA QDALVRLGVD DAPLDADAEM
HLR
|
|---|
| |