| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0842 |
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| Symbol | |
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| ID | 8413708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 935340 |
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| End bp | 937274 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022425 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_003179862 |
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| Protein GI | 257784645 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0456572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATA ACGATAACAA GCATCGTAGA TCTATGTCGA TGCTACTCTA TATTGCAGTA
GCTATCTTTG TATATCTCCT GCTTAGCAAC ACTTTATTAC CAGGTCTTTT GCGCCAACAG
ATACAAACTG TCTCCTACAG TGAGTTTCTT AATAAAATTG AAAGTAATGA GGTTACTAAA
GTAGATCTCA ACACTGGTAA CAGAAACATT AGATTTACTA CAGGCTCTGG AGATTCCGAG
AAAATCTTTG AGACTACGCA GTTCCCTAAT GATTCAACAC TGGTACAAAC GCTCAGAGAA
CACAAAGTTG ACTTCTCAGC TTCCATTCCT GACAACTCTG CAAACATGCT GATGTATGCC
CTTATTCAAT ACGGCATTCC TCTTATTATC TTCTTGGGTA TTGGTTTCTT TATTAACCGC
TCCCTTAAAC GCGCTATGGG AGACGATGGT CCATCCATGA ACTTTGGCGG CGGTTTTGGT
GGTCTCGGCG GCAATCTTGG TCGCTCAAGC GCTAAAGAAA TTAAGGGAGA AGATACTGGC
ATTACGTTTA AAGACGTTGC TGGCCAAGAA GAGGCTAAAG AGTCTATGCA AGAGATTGTT
AGCTTCCTTA AGACTCCCGA TAAGTACAAA GAAATTGGTG CTCGCTGTCC TCGTGGTGCT
CTACTTGTAG GACCTCCAGG CACCGGTAAA ACTCTTATAG CTAAAGCAGT TGCTGGTGAA
GCTGGCGTTC CTTTCTTCCA GATTGCTGGC TCTGAGTTTG TTGAGATGTT TGTTGGACGC
GGTGCCGCAA AAGTCCGCGA TCTCTTCAAG CAGGCAAATG AGAAAGCTCC TTGCATTATC
TTCATTGATG AGATTGATGC TGTTGGTAAG CGCCGCGACG CTTCCCTCAA CTCCAACGAT
GAGCGTGAGC AGACCTTAAA CCAGCTGCTC TCAGAGATGG ATGGCTTTGA TAACCACAAG
GGTATTGTTG TTCTGGCAGC AACTAACCGC CCAGAAACCT TGGACAAGGC ACTTTTGCGT
CCTGGTCGCT TTGATCGTCG TATTCCTGTT GAGCTTCCAG ATCTTAAGGG TCGTGAGGCA
GTTCTCCAGA TTCACGCCAA TGATGTAAAA ATGGAGCCAG GCGTTGACCT CTCTATCGTT
GCTAAGTCCA CGCCAGGAGC ATCTGGTGCA GACCTTGCAA ACATCATCAA TGAGGCAGCT
CTTCGTGCTG TTCGCTTTGG TCGCCGTCGT GTTACCACTG AAGACCTTAC AGAGTCTGTC
GACGTCGTTA TTGCCGGAGC AAAAAAGAAA AATAGTGTTC TATCTGAGCA TGAGAAGGAT
GTTGTTGCCT ATCACGAGAC CGGCCACGCA ATTGTTGGTG CCATCCAGAA AAACGATGCT
CCTGTCACCA AGATTACTAT TGTTCCTCGT ACTAGCGGAG CCCTTGGCTT TACCATGCAG
GTTGAGGACG ATGAGCGTTA TCTGATGAGT AAGAGTCAAG CCATGGATGA GATTGCTGTT
CTCTGTGGTG GACGCGCTGC TGAAGAGCTT ATCTTTGGCG AGATGACCAA TGGTGCCTCC
AATGATATTG AGCGCGCAAC TGCAATTGCA CGCGCAATGG TTACCCAGTA CGGCATGTCT
GACAAGCTTG GTATGGTTAC CCTAAGCCAG CAGCAAAGCC GCTATCTTGG TGGTGGCTCT
TCCCTCACCT GCTCTGAAGC AACTGCTGAA GAGATCGACG CTGAGGTTAG ACGTATTGTT
GAAGAGGGTC ACCAGCGGGC ACTTCAAACG CTTAAAGAGA ATCGCTTTAA ACTGCATGAA
ATTGCTCACT ATCTACAGAA GAAAGAAACT ATTACCGGCG AGGAGTTCAT GAATATCCTC
AAGCGTGAGA ATACCTTTGC ACCTGTAGAT AAGAACATCA ACGATGAAGG CTCTTCTACT
CCTTCAGAAG AGTAA
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| Protein sequence | MANNDNKHRR SMSMLLYIAV AIFVYLLLSN TLLPGLLRQQ IQTVSYSEFL NKIESNEVTK
VDLNTGNRNI RFTTGSGDSE KIFETTQFPN DSTLVQTLRE HKVDFSASIP DNSANMLMYA
LIQYGIPLII FLGIGFFINR SLKRAMGDDG PSMNFGGGFG GLGGNLGRSS AKEIKGEDTG
ITFKDVAGQE EAKESMQEIV SFLKTPDKYK EIGARCPRGA LLVGPPGTGK TLIAKAVAGE
AGVPFFQIAG SEFVEMFVGR GAAKVRDLFK QANEKAPCII FIDEIDAVGK RRDASLNSND
EREQTLNQLL SEMDGFDNHK GIVVLAATNR PETLDKALLR PGRFDRRIPV ELPDLKGREA
VLQIHANDVK MEPGVDLSIV AKSTPGASGA DLANIINEAA LRAVRFGRRR VTTEDLTESV
DVVIAGAKKK NSVLSEHEKD VVAYHETGHA IVGAIQKNDA PVTKITIVPR TSGALGFTMQ
VEDDERYLMS KSQAMDEIAV LCGGRAAEEL IFGEMTNGAS NDIERATAIA RAMVTQYGMS
DKLGMVTLSQ QQSRYLGGGS SLTCSEATAE EIDAEVRRIV EEGHQRALQT LKENRFKLHE
IAHYLQKKET ITGEEFMNIL KRENTFAPVD KNINDEGSST PSEE
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