| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0840 |
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| Symbol | |
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| ID | 8413706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 931554 |
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| End bp | 932072 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022423 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_003179860 |
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| Protein GI | 257784643 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0174607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATTG ACCAGCAGCA ACATACAACT CACACGCTAG TAACCCGCCT TGCAGTTCTC
TGCGGGGCGG GCGCTATTGC CTGCGCGCTT GATCAGGTAA CAAAGTTCTG GGTTCGAACT
TCAATTCCAG AAGGAACCGC AGTACCTTTT ATCCCCGGCG TTATGAAACT CTTCCACGTT
AGTAATACCG GAGCTGCGTT TTCTGTGGGC TCTGGAAATG CCCTCTTTTT TGTGGTTCTC
ACTGCTGTGG TTATCGTGGC TCTTGTTGGC TTTGTTGTTC ACGAGAAGAA CCCCCCATTG
CCACTTATTG CGCTTTTAGG TGGCGTTTTG GGTGGCGGAA TTGGAAACGC TATTGACCGT
GTTTTGTATG GTCAGGTTAC TGATTTCTTT GCTACAACGT TTGTCAATTT TGCTGTGTTT
AATGTGGCGG ATATTTTTGT AACCTGTGGC ATCCTTATTG CTTTTGTGTA CTGGATAATC
TGGGACAAAA AGCAACAACA GGGTAGTGGC AATGAATGA
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| Protein sequence | MSIDQQQHTT HTLVTRLAVL CGAGAIACAL DQVTKFWVRT SIPEGTAVPF IPGVMKLFHV
SNTGAAFSVG SGNALFFVVL TAVVIVALVG FVVHEKNPPL PLIALLGGVL GGGIGNAIDR
VLYGQVTDFF ATTFVNFAVF NVADIFVTCG ILIAFVYWII WDKKQQQGSG NE
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