| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0838 |
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| Symbol | |
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| ID | 8413704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 929724 |
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| End bp | 930545 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 645022421 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003179858 |
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| Protein GI | 257784641 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00346138 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAACG ATCGTCTAAC TCAAGCACTT AAAAATATAC TTTTAAATGG AAAGACTCTT
GCTCAAGAAA GCACTTCAAA CGTTATTTTA TACGCACATT ACGAAACTAA AGAGACAGAC
AATCCCCACA TAAAAGGATT TTTTTCACTT ACCACTGCTT TTGATTTAGA AAATTTAAAT
CAATTCTCCA AAAAACCTCA TGGAGATACT ATTGTTTGCC TTTCAATACT TGCTCGTAAA
AACTATTTTG GAAGCTTTCT GTTCTTTTTA ATGCCTACAT CAGAAAATTA TTTTACCTTT
ACTACAAATC TTATATCGAA TAAAAATACA TTGCCGAAAC AAGTTCATCC AGCTGATATT
GAACAAATTT ATACGCTTTA TACTCAAATT ATCATTACCT ATTCCGAGAG AAAACCAAAT
TGGGAAGCTA TTGTTACTTC CTTACTTATA ACACTTATTA CCTGCCTTTC TCCTGATGCT
CACTATACGT TCACTCCAGG TAACACTAAT GAGACGGTCG CTCTTATCCT TAATGAAATT
ACTGCTCATT CAGAAAGTAT CACACTTGCT AAACTGTCAG AAAAATACTC ATATACACCA
ACGTATCTTT CTGAACTTCT CAGACAAAAA TGTGGCAAAA CTTTTTCAGA ACTTGTTCTA
GAACAACGAA TGGAACGAGC AAAAACACTG TTAACTCATA CCAAATTGCC TGTCTCAACC
ATTTCTTCAA TGGTTGGATA TGGTGGAACA ACAGAGTTTT ATAAGAAATT TAAGGATTAC
TTTTCTCTTA CACCACGTGA AATGAGAAAC AAAACTTTTT AG
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| Protein sequence | MNNDRLTQAL KNILLNGKTL AQESTSNVIL YAHYETKETD NPHIKGFFSL TTAFDLENLN
QFSKKPHGDT IVCLSILARK NYFGSFLFFL MPTSENYFTF TTNLISNKNT LPKQVHPADI
EQIYTLYTQI IITYSERKPN WEAIVTSLLI TLITCLSPDA HYTFTPGNTN ETVALILNEI
TAHSESITLA KLSEKYSYTP TYLSELLRQK CGKTFSELVL EQRMERAKTL LTHTKLPVST
ISSMVGYGGT TEFYKKFKDY FSLTPREMRN KTF
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