| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0831 |
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| Symbol | |
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| ID | 8413697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 918794 |
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| End bp | 920035 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022414 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_003179851 |
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| Protein GI | 257784634 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000351407 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000535814 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATCTG AAATGATGGA AGCTTTGATG TTGCTTTGCC AGGAAAAGCA CATCGATGAG
TTGTATTTAC TGGATCGTTT GGAGCAGTCT CTGGCAAAAA GCTATGCTGA TGTCCTCCAC
CTTGATTTTG GTGCTCGCGT CACTATTGAT AGGGCTACAG GCCGTGTATA CGTTTATGAG
CTTGTTCCTA AGGGCGAGCC AGATGAGGAG ACTGGTGAGT ACACCGAGTT TGATGAGGTA
GATGTAACTC CTCCTGATAC GAGCCGTATT GCTGCTCAGC ATGCTAAGGC AGAGATTAAG
ACGCTTGTTC GTAATGCTGC TCGTGCTCAG ATTTATGATG AGTTCCGTGG TCGCGTTGGT
GACATCATTA CTGGTACCGT TCTCCAGTCC ACTCCTGATT TCACCATCAT TAAGATTCGT
GAGGGTGTAG AGGCAGAGCT TCCACACTTT GACCAGCGTC GTTTCCCTGA CGAGCGTGAT
GAGCGTCCAG CAGGAGAGCG TTATCTACAC AATCAGCGCA TCAAGGCAAT TATTGTTGAC
GTTCGTGATC CTAATGCAAC TCAGCCAGCA GTTCGTGGTG AGCGCCAGCG TCCACCAATT
GTTGTCTCTC GTACCCACCC AGATCTTATC CGTCGTCTCT TTGAGCTTGA GGTCCCAGAG
GTTTATGACG GTGTAGTGAG CATTCGTTCT ATTGCTCGTG AGGCTGGCGT TCGTTCTAAG
ATTGCTGTTT CTTCCGTTGA TGAGCGTCTT GATCCTGTTG GTGCTTGTGT TGGTCCTAAG
GGCAGCCGTG TTCGTACCGT AGTTTCTGAG CTCCGCGGGG AGCGCGTTGA CGTTGTACCT
TGGTTTGATG ACGCTGCTCG TTGTGTTGCC TCCGCACTTT CACCTGCACG TGTTTCTCGC
GTTATTGTTG ATGGCGCAAC TGGTCACGCA ACCGTTATTG TTCCTGATGA TCAGCTATCT
TTGGCTATTG GTAAAGAGGG TCAGAATGCT CGTCTTGCTG CTCGTTTGAC TGGTCTTCAC
ATTGACATCA AGAATGAGTC CCTTGCTGCA AACATTTTGA ACAACCTTCC TGAGGTTGTT
GAAGAGGCTG TTGACGAGGA AGAGATTGCT CATCGTTGCA AGTATGTGAG CCCTAGCGGA
GTTCCTTGCC GCAATATGGC AAGACCTGGT TCTGATTTCT GCGGCATTCA TGATGCCATG
GAGAATGCAG AGATTTCTTC TGATTCAGAC TCATTGATTT AG
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| Protein sequence | MASEMMEALM LLCQEKHIDE LYLLDRLEQS LAKSYADVLH LDFGARVTID RATGRVYVYE
LVPKGEPDEE TGEYTEFDEV DVTPPDTSRI AAQHAKAEIK TLVRNAARAQ IYDEFRGRVG
DIITGTVLQS TPDFTIIKIR EGVEAELPHF DQRRFPDERD ERPAGERYLH NQRIKAIIVD
VRDPNATQPA VRGERQRPPI VVSRTHPDLI RRLFELEVPE VYDGVVSIRS IAREAGVRSK
IAVSSVDERL DPVGACVGPK GSRVRTVVSE LRGERVDVVP WFDDAARCVA SALSPARVSR
VIVDGATGHA TVIVPDDQLS LAIGKEGQNA RLAARLTGLH IDIKNESLAA NILNNLPEVV
EEAVDEEEIA HRCKYVSPSG VPCRNMARPG SDFCGIHDAM ENAEISSDSD SLI
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