| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0825 |
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| Symbol | |
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| ID | 8413691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 910719 |
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| End bp | 912686 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022408 |
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| Product | DNA primase |
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| Protein accession | YP_003179845 |
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| Protein GI | 257784628 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.263135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000451849 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAACTG ATGAAGATAA AGAGCGCGTA AGACAGGCTA CCGATTTTGT TACGCTTGTT
TCCGAGACAG TTGAGCTAAA ACCTCGAGGT CAAGACTATT GGGGATGTTG CCCCTTCCAC
CAAGAAAAAA GCCCTTCATT TAAGATAAAC CCCTCTACAG GTCTTTGGCA TTGTTTTGGT
GCATGCTCCG AAGGTGGAGA TGTTTTCAGT TATGTCATGA AGCGAGAAAA CCTGGATTTT
CCAGACGCCA TCAGATATCT TGCCGATAAA GCAGGCATTA CGCTTTCAGA AGAGGCTCAT
GTTTCTAAAG GACCTCGCAA GAATCGTTTG ATTGAATGTC TTACAGAGGC CGAGAATTAC
TTTCATTCAA TGCTTATGCG CGGAAGGGGA GAAGGTCCTG AGACAGCTCG CGCCTATCTT
TCTGGTCGTG GATTTGGGGC AGGTGTCTGT AAACGCTGGA AGCTGGGATA TGCACCTGGT
AGAGGTGCAC TTGTGGCACA CTTGCGTAAA TGTGGTTTTA CCACGCAGGA GATGGTTGCT
GCTAACCTTG CTGTTGAGCG TAATGGTCGA ATCAGCGATT GGTTTTATGA TCGTGTAATG
TTCCCTATTC ATGACGAGCA GGGAAGAACC ATTGCTTTTG GCGGTCGAAT TACCAAAAAG
GTTGAAAACG CTCCTAAGTA TCTCAATACA AGGGATACTA CTGTCTTTAA TAAGGGCAAG
CACCTCTTTG CTTACGATGT AGCAAAAGAG ACTATTGCAG CTCAGTCTGA GGCTATTATT
TGCGAAGGCT ATACAGACGT TATTGCCATG CATGAGGCTG GTTTTACTAA CACGGTAGCA
GCTCTTGGTA CTGCGTTCAC GTCTGAGCAT GTCAAACTTA TTGATCGACA ACGTGCTCGC
AAAATTATTT GTATGTTTGA TGGTGATGCT GCAGGCCAAC ATGCCGCCGC ACGAGTCATT
AAATTTATTG ATAAAACAAC TGCTGCATTT CTTTGTGTTG TTTTGCCAAA TAATCAGGAC
CCCATGGAGT TTCTCGCCGA GTCTGGTGCA GAAAAGCTGC GTCCTATCTT AGATTCAGCT
CGTCCACTTA TGGATTTTGT CTTTGATGCT ACAACTGCCG AGTTTGACCT TTCCGTACCA
GGAGGTCGAG TCAAAGCGCT TGAGGCTCTG GCTTCCTTAT TGGCTCCACT TAAGACCTCA
GTGCTTCTCA GCGAGTATGC TCTTCGTGTG GCAGATTTAC TACACATTGA CGCTGAGGAA
GCAAAACGTG CAATTAAGGC CGCTCCAATT CAAGATGATG CTTCGAATTT TCGTACCTCA
AAGTCAGCGC GTAAACAGTC TCAGAAGATG TCATATAACA CTTCGAATAA TTTAACGTAT
ACCAAGTCTC CAGTTTATGT TGAAGCTCCT TCATATGACG AGGTGCCACC ATACGACGAG
GCATCAACGT ATGATGTGCC TGCTGATGTA CGCGTGCCAA GTGGCACACA GGGACTCTCC
GCAGAAGATC GCAGGCAGGT TAACTCAGAG CTTGAACTTT TGAGCGCCAT GGCCACCAAC
TTATCTTTAG TGCGAGAGTA TCAAGATCGT ATTGCAGACT TTGTATGGGC TGATGCTCGC
CATCAAACTA TGGCGTGGGC AATGCTTGCC ACTCCAGAGG GGGCTACGCC AGCGCAGGTA
GTTGCTGCGG CTGTGGCTGT TGAGCCAAAT GCGGCAGCTA TTCTTTCGTC TGGTCGAGTG
ATATCTGAGG GTAACTCCGA TACGCGCCGT TCACTTGAGT TTATTGTAGA CACTGTTGAC
TACTATTCAG TACAGCGTAA ATTGCGAGAA ATTCGTTCTA ATTTGCGCTC AGGCTCATAT
ACAGGAGAGC AATCAGACGA AACTCTTGCT GAAGAGCAGC TTGCTGCTGC TCAGGCGCTT
CAGACACGAG CGCTTGAGCT AGGTAAGAGA CTCACTTCAG GACAGTAG
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| Protein sequence | MITDEDKERV RQATDFVTLV SETVELKPRG QDYWGCCPFH QEKSPSFKIN PSTGLWHCFG
ACSEGGDVFS YVMKRENLDF PDAIRYLADK AGITLSEEAH VSKGPRKNRL IECLTEAENY
FHSMLMRGRG EGPETARAYL SGRGFGAGVC KRWKLGYAPG RGALVAHLRK CGFTTQEMVA
ANLAVERNGR ISDWFYDRVM FPIHDEQGRT IAFGGRITKK VENAPKYLNT RDTTVFNKGK
HLFAYDVAKE TIAAQSEAII CEGYTDVIAM HEAGFTNTVA ALGTAFTSEH VKLIDRQRAR
KIICMFDGDA AGQHAAARVI KFIDKTTAAF LCVVLPNNQD PMEFLAESGA EKLRPILDSA
RPLMDFVFDA TTAEFDLSVP GGRVKALEAL ASLLAPLKTS VLLSEYALRV ADLLHIDAEE
AKRAIKAAPI QDDASNFRTS KSARKQSQKM SYNTSNNLTY TKSPVYVEAP SYDEVPPYDE
ASTYDVPADV RVPSGTQGLS AEDRRQVNSE LELLSAMATN LSLVREYQDR IADFVWADAR
HQTMAWAMLA TPEGATPAQV VAAAVAVEPN AAAILSSGRV ISEGNSDTRR SLEFIVDTVD
YYSVQRKLRE IRSNLRSGSY TGEQSDETLA EEQLAAAQAL QTRALELGKR LTSGQ
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