| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0793 |
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| Symbol | |
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| ID | 8413658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 874239 |
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| End bp | 874748 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022375 |
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| Product | protein of unknown function UPF0054 |
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| Protein accession | YP_003179813 |
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| Protein GI | 257784596 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000213383 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.532433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTAACG AGTACGACAT TGTGATCAAA AATGGCGTCG AGTCACCAAT TTCTGTAGAA
GAGATTGAAG CCGATTGCAA TTTAGTACTC TCTGAAGAGG GCATTAAACG CCCTTGCGCG
GTCTCTATTT CTATTGTCAG TGATGAAGAG ATTCAACAGG TAAACCTTGA ATGGCGAGAA
AAAAATGCAC CCACTGACGT TATTTCACTT GAGGTAGAGC GTCCTGATGA TCCTGATTTG
GCTCCGGGTG AGATGTGTGA GCTCGGAGAT ATTATTCTTG CTCCTCAATT TATTGCGCGA
CAGGCAAAAG AATATGGCAC TACGGAGGCG GATGAGTTTA GGCTGATGCT TGTTCATGCC
ATGCTTCACC TGCTTGGATA TGACCATGTT GCAGATGATG AGGCAGAGGT TATGGAGGCT
CGTGAAGATG CCCTTGTTGC TCTGCTATTG ACAGATAAGA CCATTGAGCC AGTTGTTTTG
ACTCGCCACC GTGAGGGGAT TGACGAGTAA
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| Protein sequence | MVNEYDIVIK NGVESPISVE EIEADCNLVL SEEGIKRPCA VSISIVSDEE IQQVNLEWRE
KNAPTDVISL EVERPDDPDL APGEMCELGD IILAPQFIAR QAKEYGTTEA DEFRLMLVHA
MLHLLGYDHV ADDEAEVMEA REDALVALLL TDKTIEPVVL TRHREGIDE
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