| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0752 |
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| Symbol | |
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| ID | 8413617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 834883 |
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| End bp | 835263 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022334 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_003179772 |
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| Protein GI | 257784555 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000588598 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATATG CAATTAATGC AGTAGGTGTC CCAACTCCTA TGGGGCCATA CTCCCAAGGT
ACTACTGCAG GTAGATTAGT ATTTGTAACT GGTCAAATTG CAGTATCTGC AGAAAATCCA
AACAAATTAA TTGACGGTGG AGTTGAAGAA CAGACAACTC GCATCATTCA TCTTGCTCAG
TCAATTCTGG CAGAAGCAGG ATGTACGCTT TCTGATGTTG CTCAGACAAC TATCTACCTT
GCCGATATCA ATGATTTACC TAAAGTAAAT GAGATTTACA GACAGTATTT TGTCCTTCCA
GCGCCTAGTC GAGCAGTTGT TGAAGTTTCT GCGTTACCAC TTGGTGCGCT CATCGAAATG
AACTGCATCG CGTGCCGTTA A
|
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| Protein sequence | MKYAINAVGV PTPMGPYSQG TTAGRLVFVT GQIAVSAENP NKLIDGGVEE QTTRIIHLAQ
SILAEAGCTL SDVAQTTIYL ADINDLPKVN EIYRQYFVLP APSRAVVEVS ALPLGALIEM
NCIACR
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