| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0733 |
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| Symbol | |
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| ID | 8413597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 812102 |
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| End bp | 812821 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 645022314 |
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| Product | protein of unknown function DUF164 |
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| Protein accession | YP_003179753 |
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| Protein GI | 257784536 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0821562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.949915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAGT CTGTTAATTT GATGCAGCTC CAGAATATTG ATTTAAAGCT GCTAAAACTC
ACATCCAACT TGGCCTCACT GCCACAAGCA CAAAAGATTA AGAACGCCCA GCTTGCAAAG
AAAAAGATTG CTTCTCAGCT TAAGCAGGTA CTTGGCGTTA AAAAAGATGT TGAAATTGAT
ATTTCAGACC TCAATGAACA GCGTGCTCAT TATGTTCTTA AGACAGAGGA AGTTTCTGCT
GCTGTAGAAA CTGCTACTAA TCATCGTGCC ATTAGAGATT TTGATCAGCA ACTTTCTTCT
TTAGCAAAGA ATATTGAGAA GTGCGATTTC AAACTTGCAG AAAAAGCAAA AGAGCTTGAA
AAATGTAAGA AGGCTTATCA GGCCGCACAA GATTTACAGG TAAAACTTAT GAGAGAGTGT
GAGAGCCTCT CTGAGTCTCT TGAGATTGAT TCTACGGCAC TTCGTGCAGA GATTATTGAG
CTTTCTAAGT CTCGAGAAGA ACTTGCTGTT CAGATTTCTG TAGAAACACT TGAGCGCTAT
GAAACTGCAC GTAAGCGTTT TAAAGGTTTG GCAGTTGAGC ATCTTGTGGG TAATGTTCCA
AGCGTTTGTC GCGTCAAACT GCAGCCAAGC TCGTTTTACG ATCTTCAACA CAGCACTGAA
ATTGCTGAGT GCCCTTATTG CCATAGGATG CTTATTACTT CTACAACGTT TGAAGAATAA
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| Protein sequence | MSESVNLMQL QNIDLKLLKL TSNLASLPQA QKIKNAQLAK KKIASQLKQV LGVKKDVEID
ISDLNEQRAH YVLKTEEVSA AVETATNHRA IRDFDQQLSS LAKNIEKCDF KLAEKAKELE
KCKKAYQAAQ DLQVKLMREC ESLSESLEID STALRAEIIE LSKSREELAV QISVETLERY
ETARKRFKGL AVEHLVGNVP SVCRVKLQPS SFYDLQHSTE IAECPYCHRM LITSTTFEE
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