| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0722 |
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| Symbol | |
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| ID | 8413586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 800992 |
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| End bp | 801669 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022303 |
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| Product | chromosome segregation and condensation protein, ScpB |
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| Protein accession | YP_003179742 |
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| Protein GI | 257784525 |
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| COG category | [K] Transcription |
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| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
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| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00466687 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0828355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAAG AAGAGCTTAC ATATTTAAAC TCCGAGTCGC TCAAAAGCGC TCTTGAATCG
CTTCTCTTAG TTGCGACTGA TGCGATTACT ACCGCTGACT TTGCTAAGGT TACCAATGTA
GCTCCTGCCG AGGTAGCAGA AGCCCTTAAA GAACTTGCTG AAGAGTACAT GCGCTGTAAC
AGAGGATTTC AGCTTAGAGA GGTTGCTGGC GGTTGGCGCC TCTTTACACA CCCAGCTCAC
CATCAGCTGG TCAGTGACTT TGTGCTTTCT TGGGACACGC GTCGCCTGTC TCAAGCTGCT
CTTGAGACAC TTGCTGTTAT TGCCTACCAT CAGCCTGTAA CACGCGAGGG TGTCCGTGCT
ATTCGTGGCG TTAATTCCGA CGGTGTTATC TCGTCTCTTC GCGAGAAAAA CCTTGTGCGT
GAAGTGGGCA AAGAGGCAGA TAGGGGACAG GCTATTCTTT ATGGCACAAC TGCGCTTTTC
TTAGAGCGTT TTGGCCTCAA GTCGCTAAGA GAGTTGCCGC CTCTAGAAGA CTTTGCTCCC
GATGAGGAGT CTAAGCAGTT TATTCGCGAG AGGCTCTCTG GTAGAAGCTT TACCTCAACA
CTTGAAGAGG CTACAGAAGA CATTGATGAT GAGCGTTCCC TTCTGGGAGA CGATTACGAT
ACGCAGGAGG ATGCGTAG
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| Protein sequence | MAEEELTYLN SESLKSALES LLLVATDAIT TADFAKVTNV APAEVAEALK ELAEEYMRCN
RGFQLREVAG GWRLFTHPAH HQLVSDFVLS WDTRRLSQAA LETLAVIAYH QPVTREGVRA
IRGVNSDGVI SSLREKNLVR EVGKEADRGQ AILYGTTALF LERFGLKSLR ELPPLEDFAP
DEESKQFIRE RLSGRSFTST LEEATEDIDD ERSLLGDDYD TQEDA
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