| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0719 |
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| Symbol | |
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| ID | 8413583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 797256 |
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| End bp | 799274 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022300 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179739 |
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| Protein GI | 257784522 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.76998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00730908 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGATTGCTC TTGCGGATAA GATTTCAAAG TCATTTGGCG GCAGAGTCCT TTATTCAAAT
GCAACGCTTC AGCTCAACGC AGGAGAGCGT TGGGCTTTAG TTGGTCCTAA TGGTGCCGGT
AAGACAACAC TTCTGAAAAT CATTATGGGC CTTGAGTCGG CTGATGAGGG AACCGTTACC
TTTGCAAAAG ACGCCACCCT TGGATACCTT GAGCAAGAGA CAGAGCTTAT GGGGGACAGG
ACTGCTCTTA ATGAAGTTAT TGAGTCCGCT CATGAGATTA AACAGTGGGA GCGAAAGATT
AACGATCTTT CTCTCAAGAT TACTGAAACT CCTGAAGGTG CAATACTTAA CAAGTATCTG
GATGACTATG CTCATGCCAT GGAACGCTTT GAACGTCTTG GCGGCTATGA GCTTGAAAGC
AAGGCTCGTC AGATTCTTGC AGGTCTCGGT TTCCCGGTAG AAGACTTTGA TAAGCCTGCT
AAGGAGTTTT CAGGTGGCTG GCAGATGCGT ATCTCTTTGT CAAAGTTGCT GCTGCGTCGT
CCTGATGTTC TTCTTCTGGA TGAGCCAACT AACCATCTTG ACCTGGAATC TGTTCAGTGG
CTTGAGAGGT TCTTATCGTC ATATGACGGT ACAGTTTTGC TGGTAAGTCA TGATCGTTCG
TTTATGGATG CTTGTGTGAC GCATGTTGCA GCACTAGAGA ATCGCATGCT GGTAACGTAT
ACTGGCAACT ATTCCGGTTA TCTTCATCAG CGAGAAGAAA ATCTTGAGCA GCTTCGTGCT
AAACGTGCAG CTCAAGAGCG CGATATTGCT CACATGGAGA CCTTCATTGA GCGCTTTAGG
TATAAGCCAA CTAAGGCCAA ACAGGTACAA GAGCGCGTGG CAAAGGTCGA GAAGATCCGT
GAAGAGCTGG TAGTTCTTCC AGAGCAGTCT CACCATATGC ATTTTAAGTT CCCAGATCCT
CCCCGTACCG GAGATACCGT TATTTCTCTT GAGGGTGTGG CAAAATCATA TGAGGATAAC
TTTGTCTACG ATAACGTTGA TCTCAAACTA TATCGCGGAG ATCATGTAGC TCTTGTTGGT
CCTAACGGAG CTGGTAAATC TACTCTAATG AAGCTTATTG CTGGAAAGCT TCAGCCAGAT
ACAGGAGAGA TTAGCCTTGG TCAAAATGTC ACTGAAGCCT ACTATGCACA GCATCAGCTT
GAAGAACTTA ATCCAGCAAA TACAGTACTT GCAGAGCTTG ACACGGTTGC TTCGGGGTGG
ACTACCTCTG AAGAACGCAG ATTGCTTGGT GCATTCCTTT TCCACGGTGA TGATGTAGAA
AAACGTGTGA ATGTACTTTC TGGTGGGGAG CGTGCTCGTT TAGCGCTCGC AAAAATGTTG
GTTTCTCCAG ATCCACTTTT GCTTCTGGAC GAGCCAACTA ACCACCTTGA TATTGATTCC
GTTGATGTTC TGGAGAAGGC ACTTATTGAC TTCCCGGGAA CCATTATTTT AATCAGCCAT
GATGAGCACC TTATTAGAGC TGTAGCAAAT AAAGTTGTAG ATGTTCGTGA TCATAAGGTA
ATGGTTTATG ACGGTGATTA CGATTACTTC CTCTTTAAAC TTGCTGAGCT TCAAGCAGCA
GCTCAAGAGG AGTTGTCGAA CAAGACAGTA TCCTCGTATG GTACATCGGG TGCAAGTTTA
GTTAAGAGCA CCGCACCAAA GGTAGGTCAA GCTGTAGGAT CTTCTCGCAA TGTGAAGACC
AAGGAGCAGA GAAGGGCTGA GGCGGAAGAG CGCAATCGTA GAAGTCGAGC GCTTAGAGAG
ACCAAGAAAC GTCTGGATGA GGTTGAAGCG GCACTTACTC CTGCACACAA ACGCTACGAT
GAGCTCATGG CGCTTATGGC TGATGAAGCC CTCTATAATG ACCAGCAAAA GTTTGATGAG
TGTATGACTG AATATCAGGC ACTTTCCAAA AAAATTCCTG CTCTTGAGGC TGAGTGGTTG
GAGCTTTCTG AAAAAATGGA AGCAGACATT GATGAGTAG
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| Protein sequence | MIALADKISK SFGGRVLYSN ATLQLNAGER WALVGPNGAG KTTLLKIIMG LESADEGTVT
FAKDATLGYL EQETELMGDR TALNEVIESA HEIKQWERKI NDLSLKITET PEGAILNKYL
DDYAHAMERF ERLGGYELES KARQILAGLG FPVEDFDKPA KEFSGGWQMR ISLSKLLLRR
PDVLLLDEPT NHLDLESVQW LERFLSSYDG TVLLVSHDRS FMDACVTHVA ALENRMLVTY
TGNYSGYLHQ REENLEQLRA KRAAQERDIA HMETFIERFR YKPTKAKQVQ ERVAKVEKIR
EELVVLPEQS HHMHFKFPDP PRTGDTVISL EGVAKSYEDN FVYDNVDLKL YRGDHVALVG
PNGAGKSTLM KLIAGKLQPD TGEISLGQNV TEAYYAQHQL EELNPANTVL AELDTVASGW
TTSEERRLLG AFLFHGDDVE KRVNVLSGGE RARLALAKML VSPDPLLLLD EPTNHLDIDS
VDVLEKALID FPGTIILISH DEHLIRAVAN KVVDVRDHKV MVYDGDYDYF LFKLAELQAA
AQEELSNKTV SSYGTSGASL VKSTAPKVGQ AVGSSRNVKT KEQRRAEAEE RNRRSRALRE
TKKRLDEVEA ALTPAHKRYD ELMALMADEA LYNDQQKFDE CMTEYQALSK KIPALEAEWL
ELSEKMEADI DE
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