Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0667 |
Symbol | |
ID | 8413528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 744532 |
End bp | 745653 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645022245 |
Product | hypothetical protein |
Protein accession | YP_003179687 |
Protein GI | 257784470 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.747823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTGTC CAAACTGTGG ATCTGAGGTC GATGAAGGTG CTTTAACCTG CCCTCATTGT CAAATTGATC TAAGTTTGAC TCAAAGAATT CCTGTTGCTC AAGCTCATTG GTGCCCTCAT TGTGGCGCTT TAGTGCCCGC TGCTGCAGAA AGTTGCCCAA AGTGCGGTCT TCCTCTGCCA CAGGCGGTGC CTGCCACTCG TCCAGCTCGA GCCATCAGGC CTACGCGCGA TATTAAGCTC CCAGAGATTG ACGCAGCTCC AGTGTCTGGC GAGAAGACCA ATTCACTCGT AGACGCTGGG CACGATGCAG TATCTTTTGC TTCGGCAGAT TCTACATCCT TGCAACAAAC GCCAACTGAC AATGCTGACC CAGATGCCAC TAGCGCGTTT GCCTCGGTAA ACCGCAGGCC GGCTCCTCGT TTTGAATCTG CAATTCCTTC CGAACCTTCA AGAGAAAATC TTCCTGAGGC AGAAGGAATC CCTCGTACAC GTGTTATTCT GCTCTCGGCG CTTCTTGTCA CATCACTGGT GGTTGCTGCT ATTTTTATCC TTACACATCC ATGGGATCCT CAGGCAACTG ATAATCGCGC AAAAGTCGAA GCACCGGTTT CATCTACTCC TACCACCACT CCTGTTGCAC ACCTAACGGG TCAAGACACC AGTGGTACTC AGCAAAATAC AAGTTCGGAT GCTGTTTTTG ACGCGCTTAA TAGTGATTAT CAGAAGCTAG GAGACCTCTC AAAACGCCTT GATGATAACG AGAAAACCTT TGATCAGGTT GCCATTACTG GCTCTGATCA AGAGCGCTCT GATGGTCAGC AAGAAGCAGA GCAGATTTCG CTGGATATTA GCAATGTCAT CTCTGACCTA TCTAGTCTTG ACGACTCCAA CGGGAACTAT CGTCAGTCTA TTGAAAATCT CACCAAGCTT GGTAACTGGC TTCGTAACCG TTCTGATGCT TTGAGCGAGG GATGGAAGCG CTCAGTTGCT TCTTCTAATC CTTCTCAGGA CAAAGAGAAA ATATTGGCAC CAGTCGATAA CATTCGTGAC TCTAGCGGTT CCAGCTCATA CCAGAAACTT TTTGATGAAA ATTACGTGAA TTGGAAGCCA CAAAAGCAGT AA
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Protein sequence | MRCPNCGSEV DEGALTCPHC QIDLSLTQRI PVAQAHWCPH CGALVPAAAE SCPKCGLPLP QAVPATRPAR AIRPTRDIKL PEIDAAPVSG EKTNSLVDAG HDAVSFASAD STSLQQTPTD NADPDATSAF ASVNRRPAPR FESAIPSEPS RENLPEAEGI PRTRVILLSA LLVTSLVVAA IFILTHPWDP QATDNRAKVE APVSSTPTTT PVAHLTGQDT SGTQQNTSSD AVFDALNSDY QKLGDLSKRL DDNEKTFDQV AITGSDQERS DGQQEAEQIS LDISNVISDL SSLDDSNGNY RQSIENLTKL GNWLRNRSDA LSEGWKRSVA SSNPSQDKEK ILAPVDNIRD SSGSSSYQKL FDENYVNWKP QKQ
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