Gene Apar_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0661 
Symbol 
ID8413521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp737332 
End bp737604 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content40% 
IMG OID645022238 
ProductChorismate mutase 
Protein accessionYP_003179681 
Protein GI257784464 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01805] monofunctional chorismate mutase, gram positive-type, clade 2 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATC AGCTAGAGTT GCTTCGCCAG GAAATCGATT CGATTGATGC GCAAATCTTT 
GACCTCTTTG AGCAAAGACT CACGGTAGCC AAACAAATTG GTGCTTACAA AAAGGAGCAT
GAGCTCTCTG TTCTTGATTC CTCAAGAGAG AATCACAAAA GAGACCAGGT TAAAGTCTCT
GTTTCAAATG AACTTGAACC TTATGCTTTA GAGTTACTTG AGGTTTTAAT GAAGGCTGCA
AAAGCAGTTC AGGAGACATC TGATGAGCTT TAA
 
Protein sequence
MTNQLELLRQ EIDSIDAQIF DLFEQRLTVA KQIGAYKKEH ELSVLDSSRE NHKRDQVKVS 
VSNELEPYAL ELLEVLMKAA KAVQETSDEL