| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0659 |
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| Symbol | |
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| ID | 8413519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 734960 |
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| End bp | 735850 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022236 |
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| Product | dehydroquinase class II |
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| Protein accession | YP_003179679 |
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| Protein GI | 257784462 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
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| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.969624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGCA ATGCAATTGC TCATGAAATT CTTAACGCTA TTGGAGGGTC AAAAAATCTA
ACTCACAATG AAGTCTGCAT GACGCGACTT CGTCTTTCAA TTAGTGATAT GACGCTTATT
GACTACGAAC AGTTATCCAC CGCTACTGGT GTTCTTGGCA TTGTTGGAAA AGGTGCTAAC
GGACTTGAAG TAGTTTTTGG CCCTAACCTT GTTAACCAAG TAAATAACTC CCTTGATCAG
ATTCTTGGAA AACCAGAGAT AACTTCCTGT TCTCTGAACG AGAAACACTC CACCTCTTTA
CCCACACACA ATGAAGAGGT AGACGACCTC ATCTCGCTGC TTGCTCAGAA AAATACCATT
GACCAAAACA AAGAAGACTT TGACAGCCTT ACCTCTGACT TAGACACAGA CGACTTCGAA
GACAACTATG AGGATGACCT CGAAGCCCCT CGCCTTCTGA TTATTAACGG TCCAAACATC
AATATGCTGG GTATTCGTGA ACCAGAAATT TACGGAAAAG CTGACTACAG AACCCTTATA
GAGGCTTGTA AGACAGAAGC TCAGTCTCAA GGATTTTCTG ATTGTGTCTG CTATCAATCA
AATCACGAGG GCGATCTTAT TGATGCAATC CAGGATGCTC TAGGAAGCTA TGACGGCATC
ATCATCAATC CTGCGGCCTA TACGCACACT TCAGTTGCTC TGCTTGATAC CGCACTTGCC
GTGCAGCTTC CTATGATTGA GGTTCACCTT ACAGACATCT CTACTCGAGA AGACTTTAGA
CACATTTCTT ATATAAAAGA CGCCTGTTTT GCCACAGTTG CTGGTAAAGG TATTGATAGC
TATAGAGAAG CAATCCAGCT GATGGCAACT CACCTCAAAG CTGAAGCATA A
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| Protein sequence | MDSNAIAHEI LNAIGGSKNL THNEVCMTRL RLSISDMTLI DYEQLSTATG VLGIVGKGAN
GLEVVFGPNL VNQVNNSLDQ ILGKPEITSC SLNEKHSTSL PTHNEEVDDL ISLLAQKNTI
DQNKEDFDSL TSDLDTDDFE DNYEDDLEAP RLLIINGPNI NMLGIREPEI YGKADYRTLI
EACKTEAQSQ GFSDCVCYQS NHEGDLIDAI QDALGSYDGI IINPAAYTHT SVALLDTALA
VQLPMIEVHL TDISTREDFR HISYIKDACF ATVAGKGIDS YREAIQLMAT HLKAEA
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