Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0631 |
Symbol | |
ID | 8413491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 711113 |
End bp | 711601 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645022209 |
Product | dihydrofolate reductase region |
Protein accession | YP_003179652 |
Protein GI | 257784435 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCAA TTGTTTCTGT AACACGCGAT TGGGGTATCG GATGCGATGG GGACCTTCTT ATTCCCAACA AAGCCGATAT GAAGTACTTT GTTGAGCACA CGCGCAGCTG CACGGTTATC ATGGGCAGAA AAACGCTGGA GAGTTTTCCT GGAGGACCAC TCAAGGGCCG CCGCAACATT GTCATCTCTA GAAATACCAA CTACCAGGTC GAAGGTGTTG AGATTGTGTC GTCGGCTGAG GAAGCACTTC GTTTAGTTAA GGATGAAGCT CCAGAAAAAG TCTGGCTTAT TGGTGGCGCT TCGATTTACC GTGCCCTTCT CGACAGGTGC TCTTACGCAT ACGTTACAAA ACATGATACG GTGGTTGATG CGGATACGTA CTTCCCCAAT CTAGATGAAG ACCCTGCGTG GAAAGTTTGT AACGAGGAAG ACGGTGGAGT GACTCCAGAA GGTGTTGCTT TTAAGTTTGT AACCTACCAG CACGTTTAG
|
Protein sequence | MNAIVSVTRD WGIGCDGDLL IPNKADMKYF VEHTRSCTVI MGRKTLESFP GGPLKGRRNI VISRNTNYQV EGVEIVSSAE EALRLVKDEA PEKVWLIGGA SIYRALLDRC SYAYVTKHDT VVDADTYFPN LDEDPAWKVC NEEDGGVTPE GVAFKFVTYQ HV
|
| |