| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0607 |
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| Symbol | |
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| ID | 8413464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 676577 |
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| End bp | 677770 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022182 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179628 |
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| Protein GI | 257784411 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0567231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA TCGTTTTAAA GAATATAAAA AAGATTTACC CAAATGAGAA AAAGCGCAAG
TCTCTCTTTG GTAAGAAAAC TGAGCAGAAA AAGAGCAATC TTGAGGTGAC TGAAGAAGGC
GTTGTTGCCG TTCAAGATTT CAATCTCACT ATTAAGGAGC ACGAGTTTGT AGTGCTCGTT
GGCCCTTCAG GTTGTGGCAA ATCTACTACG TTGCGTATGA TTGCAGGTCT AGAAGATATT
TCTGCCGGTG AGCTTTATAT TGATGGAAAG CTTGTTAATG ACGTTGCGCC AAAAGATCGA
GATATTGCAA TGGTCTTCCA AAGCTATGCT TTGTATCCAA ATATGACCGT TTATGACAAC
ATGGCGTTTA CTCTTAAGCT TAAAAAGGTT GACCCACAAG TTATTGACGA GAAGGTCCGT
GCAGCTGCAG AGACATTAGG CATTACGGCA TATCTTGATC GTAAGCCAAA GGCTCTTTCT
GGTGGTCAGC GTCAGCGTGT TGCAATTGGT CGCGCAATTG TCCGCGATCC AAAAGTCTTT
TTGATGGATG AGCCGCTCTC AAATCTTGAC GCAAAACTGA GAAATCAGAT GCGTACAGAG
ATTATTAAGC TTCGTCAGAA AGTTAATGGA ACCTTTGTCT ATGTTACACA CGATCAAACA
GAGGCAATGA CCTTAGGTGA CCGTATTGTT ATCATGAAGG ATGGTTTTGT CCAGCAAATC
GGAACTCCAC AAGAAGTGTT TAACAGACCT GCAAATCTGT TTGTTGCTGG TTTTATTGGT
ATGCCGCAAA TGAATTTCTT TGACGCGCAC CTTATTCGCG TGGACAATGA GTTCCATGTA
GAGACTGAAA ACATGTCATT TGAAATTTCT CCTGAGATGG CCAATTTGTT AGCACAGTCT
TGGGTTGCTT CACCAGCAAC AGACGTTATT GTTGGCATCA GACCTGAGCA GATTTATCTG
ACTGAACCAA ATCAAATTGG TGCCTTTAAG GGAAATCTTG AGGTAAGCGA ACTTATGGGC
TCTACAGTTC ACCTTCATGT TCACACTGAT GATGGTAACT TTGTCCTTAT CGTGCCAGCA
ACTGAACTTG CAAAACGTAA CCTCAAAATT GGTGATGAGA TGTGGTTTAA ATTTGAAGAT
AATGCTGTTC ATCTCTTTGA CAAGAATACG CAAGATAATC TAGTTAAGTA TTAA
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| Protein sequence | MAEIVLKNIK KIYPNEKKRK SLFGKKTEQK KSNLEVTEEG VVAVQDFNLT IKEHEFVVLV
GPSGCGKSTT LRMIAGLEDI SAGELYIDGK LVNDVAPKDR DIAMVFQSYA LYPNMTVYDN
MAFTLKLKKV DPQVIDEKVR AAAETLGITA YLDRKPKALS GGQRQRVAIG RAIVRDPKVF
LMDEPLSNLD AKLRNQMRTE IIKLRQKVNG TFVYVTHDQT EAMTLGDRIV IMKDGFVQQI
GTPQEVFNRP ANLFVAGFIG MPQMNFFDAH LIRVDNEFHV ETENMSFEIS PEMANLLAQS
WVASPATDVI VGIRPEQIYL TEPNQIGAFK GNLEVSELMG STVHLHVHTD DGNFVLIVPA
TELAKRNLKI GDEMWFKFED NAVHLFDKNT QDNLVKY
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