| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0602 |
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| Symbol | |
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| ID | 8413459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 671565 |
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| End bp | 672419 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645022177 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_003179623 |
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| Protein GI | 257784406 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.428265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGT CTTCAACACA AACTAATAAT GCGCAGGGTG CAAGTACAAG TCTCGTGGCT
GTTTCTGCTC GAGATGCATG GTACCCAACG CATCAGCGTG ATCAGTTCAT TTTGCGTCAG
CTGGTAAGTA AAGACTTCAA ACTCAAGTAT CGCCGTTCTA TCTTGGGTGT TGTATGGTCG
GTTTTAAACC CACTTTTGAT GATGGCAGTT ATGGCAGTTG TCTTTTCTAC TTTTTTGGGA
AACCGCGCTG AAGATGTTGT GAACTATCCT CTGTATCTAA TTCTTGGTAA TACGGCATTT
CAGCTGATGA ATGATGCGAC TACTATGGGA ATGCGCTCAA TTATTGATGC ATCCAGCCTG
CTGAAGAAAG TTCGCATCAA TCGCGTTGTT TTTCCTGTTC AGAAAGTACT TTTTGCAGTT
GTAAACTATC TTTTCTCGCT TATTGCTGTT GGCATTGTTA TGCTTGTCTT CCGTATCCCA
CTGACGATCT ACGCACTGCT GACACCTGTT GCTTTGCTGC TCTTGACTGG TTTTTGTATT
GGCCTTGCAA TGCTTCTTTC GGCTCTTGCG GTCTTTTTTA GAGATGTCAT TCATTTGTGG
AGTGTTGTGA CTACCGCATG GATGTATGGC ACACCATTGT TTTACTCCGT TAACATTATG
TCACCTTGGA TGCTTCAGAT TGAGCGCTTT AATCCAATGT TCCACTTTGT GACATTTATT
AGAGACTGTC TCCTTTTTCA GAAGTTCCCT GCAACAAGCA CAATTTTAGG TTGTCTTGTT
TCTGCAGTTC TTGCCTTAGT TATCGGCTAC ACTGTTTTCC ACAAACTAGA GAAGAAATTT
ATTCTGCACA TTTAA
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| Protein sequence | MSESSTQTNN AQGASTSLVA VSARDAWYPT HQRDQFILRQ LVSKDFKLKY RRSILGVVWS
VLNPLLMMAV MAVVFSTFLG NRAEDVVNYP LYLILGNTAF QLMNDATTMG MRSIIDASSL
LKKVRINRVV FPVQKVLFAV VNYLFSLIAV GIVMLVFRIP LTIYALLTPV ALLLLTGFCI
GLAMLLSALA VFFRDVIHLW SVVTTAWMYG TPLFYSVNIM SPWMLQIERF NPMFHFVTFI
RDCLLFQKFP ATSTILGCLV SAVLALVIGY TVFHKLEKKF ILHI
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