| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0521 |
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| Symbol | |
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| ID | 8413372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 603735 |
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| End bp | 604511 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022091 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_003179543 |
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| Protein GI | 257784326 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000535463 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000708931 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAATC AGAACGAAGG CTGCTCTTGC GGTCATAACC ACGAGGAAGA GCATGGCAGA
CACGGCGGTT GCTGTGGTCA TCATGGCGAG CACGGCCATG GTGAGCATGG ACACGAAGGC
TGCTGCGGTC ATCACGGTCA CGGCGGATGT CATCACGCAA AAGACCAGAT TGGTATTTTT
AAGGTAGGCC CTCTTGAAAC TAACTGCTAC ATCTATGTTT CTGGCAATGA GTGCATGATT
ATAGACCCCG GTGCATCGGG CGCAGAGATT GCTGCACAGT TATTAAATCT TGAACTTAAG
TATATTGTCG CCACTCACGG TCATGCAGAC CATGTTGGCG GCGTTAAGGC TTTGAAGCTT
GCAGTTTCAA GTGCTCAATA TCTGATTAAC GAGGCAGACA ATGAGCTTGC ACAGAGGGCT
CACAACTCAA ACGACATTTA TGATGATGCT CCAGAGCCAG ATGGTATTCT CCATGAGGGA
GATGTTCTTT CCGTTGGAAC AGCACAGTTC AAGATTATGG AAACTCCTGG TCATACTCCT
GGTGGCATTA TTTTGGTGGG AGAGGGAACA GCTTCCGGCG CCGTTTTTGT AGGTGACACA
CTCTTCCAGG GTTCTGCTGG AAGAACAGAT CTCCCAGGCG GCGATTTTGA CACGCTCAAA
GTATCTTTAA ATCGCATTAA GACAGAGCTT GATCCAACCT CTATCATTTT ATCAGGGCAC
GGAAATCAAA CGTCTTTAGA GGCAGAGCTT GCAACCAATC CGTTCTTGCA GGATTAA
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| Protein sequence | MANQNEGCSC GHNHEEEHGR HGGCCGHHGE HGHGEHGHEG CCGHHGHGGC HHAKDQIGIF
KVGPLETNCY IYVSGNECMI IDPGASGAEI AAQLLNLELK YIVATHGHAD HVGGVKALKL
AVSSAQYLIN EADNELAQRA HNSNDIYDDA PEPDGILHEG DVLSVGTAQF KIMETPGHTP
GGIILVGEGT ASGAVFVGDT LFQGSAGRTD LPGGDFDTLK VSLNRIKTEL DPTSIILSGH
GNQTSLEAEL ATNPFLQD
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