| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0516 |
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| Symbol | |
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| ID | 8413367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 595147 |
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| End bp | 595863 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022086 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_003179538 |
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| Protein GI | 257784321 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00401323 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTAGTG CAGTAGTTAT TGGTACCGGC AAGATGGGAA AGCTCATTGA GCAAACCCTG
ATTGATCACG GCTTTGAAGT GCTTGGTGCT TTTGGTCACG AGAATATCAA TCAGCTGAAT
ACCGTTGTGC AGACGCCTGA TGTGGTTGTG GATTTCTCTG GCGTTGCTGC CTTTGATGCT
GTTGTCGGCT TTGTACGTGA GCGCGGGTGT GCGTTGGTTT CTGGCACCAC GGGTTTCTCG
CCAGAGCAAC TTTCAGAGCT GAAGCAGCTG GGAGAGAGTG CGCCTGTGAT CCACGCGGCA
AACTATTCGG TGGGTGTTGC TGTGCTGAGG CGTGCGGTGA CCATGGCTGC TGAAGCACTT
AACGGCTGGG ATACAGAAAT TGTGGAGACG CACCACAACC AGAAGGTTGA TGCTCCGTCC
GGCACAGCAA AACTGCTTTT AGCTGCTATT GACCCAGAGG GAACTCGTCC CGTTGTTTCT
GGTCGCGAGG GTTTCTGTGG AGCTCGCACT AAAGACGAGA TTGGCGTGTT TGCACTGAGA
GGCGGCACAG TGGCTGGCAC TCATGAGGTG CACTTCTTTG GACAGGATGA GGAAGTGTGT
CTGATGCATC GCGCAACATC TCGTCAGATT TTTGTGAACG GTGCCGTTGC TTGTGCTGAG
AAATTGCTTA CAAAAGCTCC AGGTTTTTAT ACCTTCGAAG ATTTAATTTT TGGATAA
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| Protein sequence | MPSAVVIGTG KMGKLIEQTL IDHGFEVLGA FGHENINQLN TVVQTPDVVV DFSGVAAFDA
VVGFVRERGC ALVSGTTGFS PEQLSELKQL GESAPVIHAA NYSVGVAVLR RAVTMAAEAL
NGWDTEIVET HHNQKVDAPS GTAKLLLAAI DPEGTRPVVS GREGFCGART KDEIGVFALR
GGTVAGTHEV HFFGQDEEVC LMHRATSRQI FVNGAVACAE KLLTKAPGFY TFEDLIFG
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