| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0512 |
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| Symbol | |
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| ID | 8413363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 590308 |
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| End bp | 591483 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022082 |
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| Product | Endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_003179534 |
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| Protein GI | 257784317 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00516885 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGAG TTTTGTCTCT TAGCCTTAAA TTTATTACTG GCCTACTAAA AAGGGTTCTT
GCGCCCCTTT TTAAATTTGT AGGCGGACTA TTTATTCTAG CTTTGCTAGT TCTTGGTGGG
TATGTCCTCT ACCTGCAGTT TACTTACTAC CGCATTCCTG ACAATACCTC TATATCCAAT
CAAGGCGCCT CACCTGAAGC TACAACGGTG CAGGTAGGCC AAACTTACAC AGCCTCAACC
TATAACATTG GCTTTGGCGC TTACACACCT GATTACACCT TCTTTATGGA TGAAGGCATC
ATGCAGGATG GCACACGTAC CGTGGGAACT CACGGGCGCG CAGTAAGCAG AAACTCCGTT
CTATACACCA CAAACGGTGC TCTCACCACC GTTTCTTCTC TCAATGGTGG AGCTGCACCT
GACTTTATTC TCTTCCAAGA AATTGATACT TCATCTGATA GAAGCTGGCA TGTTAATCAG
GTTTCTGAAG CAGAGAACCG CTTTAGTTCT TATGCGTCAT ATTTTGCTCA AAACTTCCAC
ACCGCGTTTC TCGCCTATCC ACTCACTGAA TTCCACGGAA CCTCTAACTC GGGAATTCTT
ACGCTTTCAA ACGTACTTGC TTCAAGCGCT ACTCGTCGCA CCTATCCCAT TGACGAGTCA
TTCCCAACAA AATTCTTTGA TCTAGACCGT TGCTTCATGA TTACACGCTA CCCCACAAGT
GATGGTCATG AGCTGGTACT TATTAACAGC CACATGTCTG CTTATGATAA AGGTGGCACC
AGCCGAGCTC AGCAGCTTGC ACTTCTCACC AAAGTTATGT CCGAAGAGCG CGCTAAGGGT
AATTACGTTA TTGCGGGCGG CGACTGGAAC CATGCAATTT TAGGCTCGCT TACTCTTTAT
CCTTCCATCC AGCAAGTACC TGACTGGGTA GCGGAACTCA AAAAATCTGA TTTGCCAGAA
GGCTTTACTG TTGTGGCTCC AGACAACCTT AACAACGTTC CTACCTGCCG CGGAGATGAC
ATTCCTTACG AGAAAGACAA AACATACACC ACCACTGTTG ATGGCTGGAT TGTCTCGGAC
AACGTTGTTG CAACCGCTAA AAATGTTGAC ACGCAGTTTG CCTACTCTGA TCACAACCCG
GTTCTACTGT CTTTCACATT AAAGAGCGCA GAGTAG
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| Protein sequence | MKRVLSLSLK FITGLLKRVL APLFKFVGGL FILALLVLGG YVLYLQFTYY RIPDNTSISN
QGASPEATTV QVGQTYTAST YNIGFGAYTP DYTFFMDEGI MQDGTRTVGT HGRAVSRNSV
LYTTNGALTT VSSLNGGAAP DFILFQEIDT SSDRSWHVNQ VSEAENRFSS YASYFAQNFH
TAFLAYPLTE FHGTSNSGIL TLSNVLASSA TRRTYPIDES FPTKFFDLDR CFMITRYPTS
DGHELVLINS HMSAYDKGGT SRAQQLALLT KVMSEERAKG NYVIAGGDWN HAILGSLTLY
PSIQQVPDWV AELKKSDLPE GFTVVAPDNL NNVPTCRGDD IPYEKDKTYT TTVDGWIVSD
NVVATAKNVD TQFAYSDHNP VLLSFTLKSA E
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