| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0504 |
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| Symbol | |
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| ID | 8413355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 579927 |
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| End bp | 581441 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022074 |
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| Product | glutamyl-tRNA synthetase |
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| Protein accession | YP_003179526 |
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| Protein GI | 257784309 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0630842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.758869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAGAGA AGCAGGTAAG GGTACGTTTT GCACCATCCC CAACAGGTAA GCTACACATT
GGAGGTGCGC GCACTGCTAT CTATAACTGG GCTTTTGCTC GTGCAAATGG TGGCAAGTTT
ATTCTTCGCA TTGATGACAC AGATCCTACG CGCTCAACTG AAGAGAACAC TCAGATTATT
CTTCGTGCTA TGAAGTGGCT TGGTCTTGAT TGGGACGAGG GTCCAGATAA GGGCGGCGAT
TGTGGCCCTT ACAGCCAGAC CGAGCGCCTT GACCTGTATC GTGAAGCAGC AAATAAACTG
CTGGCAGAGG GCAAGGCATA CCCTTGCTTC TGCACACCAG AGAAGCTTGC TGAAGATAAG
AAAGCTGCTG AGGAGCGCCA TGACCCCTTC CAAGGCTATC AGCGTACCTG CAGAAACATT
GATCCTGCAG AGGCACAACG CCGCATTGAT GCTGGCGAGC CTTATACTAT CCGCATTAAG
GTTCCTCTGG ACCGCGGCGA CGTCATTGTC CACGATGCTG TTCACGGTGA CGTAACCTTT
AACGCTCGCG AGCTTGATGA CTTTATCATC TTCCGATCTG ATGGCACCCC AACCTATAAC
TTTGCCACCG TTGTTGATGA CGCTGACATG GGCATTACCC ACATCATCCG TGGCGACGAT
CACCTGTCTA ACACTCCTCG CCAGATTATG GTGTACGAAG CTCTTGGCGC ACCTGTTCCA
ACCTTCGCTC ATATCTCCAT GATTTTGGGT CCTGACGGCA AGAAACTCTC CAAGCGACAT
GGTGCAACCT CTGTTGAAGA GTATCGTGAC CAGGGCTATC TTGCAGATGC CTTTGTCAAC
TACCTGGCTC TTCTCGGCTG GTCACTTGAT GGCGAGACAA CCATTGTTCC TCGCGACGTT
TTGGCATCTC AGTTCTCTTT GGATCACGTT TCCAAAAACC CTGCAAAGTC CGATCCTGAA
CGTCTGAACT GGATTAATGC TACCTATCTT GCCAATATGG ACAATCAGAC CTTTGCACAG
ACTGTTCTAA TTCCAGAACT TGTTAGCGCA GGTCTTGAGC CTGTTCAGGG CAACGCAACT
GACGCAGATG AGATTTACGC AACTCGTCCA GGTTGGTATG ACCTGCTCTC CGAGATTCTT
CGTCCTCGTA CCACAGTAAG CCCAGACGTC ATTGAGAAGT CACGCTTTTT GTATGAAGGT
GCAAACGTCA CCTTTGATCA GAAGAGTGTT GAGAAGGGCC TTACCAAAGA CGCTGCTCAA
AGTGCAACTG TTCTTACTGC TGCAAAGACT GCTCTTGAGG GCGTTTCTGA GGAAGAGTGG
AAGGCTGCAG CGATTGATGC TGCCCTTGAG GTGCTTCCAG AACAGCTTGA CCTAAAGAAA
CGCGTTGTCT TCCAGTCCAT TCGCGTTGCT GAGTGTGGCA ACATGGTCTC CCCTCCTCTT
GGAGAGTCTA TGGAGCTTCT TGGCCGTGAG GTTTGCCTTG CTCGCCTTGA CCGCGCCATG
GAGCTTTGCA AATAA
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| Protein sequence | MSEKQVRVRF APSPTGKLHI GGARTAIYNW AFARANGGKF ILRIDDTDPT RSTEENTQII
LRAMKWLGLD WDEGPDKGGD CGPYSQTERL DLYREAANKL LAEGKAYPCF CTPEKLAEDK
KAAEERHDPF QGYQRTCRNI DPAEAQRRID AGEPYTIRIK VPLDRGDVIV HDAVHGDVTF
NARELDDFII FRSDGTPTYN FATVVDDADM GITHIIRGDD HLSNTPRQIM VYEALGAPVP
TFAHISMILG PDGKKLSKRH GATSVEEYRD QGYLADAFVN YLALLGWSLD GETTIVPRDV
LASQFSLDHV SKNPAKSDPE RLNWINATYL ANMDNQTFAQ TVLIPELVSA GLEPVQGNAT
DADEIYATRP GWYDLLSEIL RPRTTVSPDV IEKSRFLYEG ANVTFDQKSV EKGLTKDAAQ
SATVLTAAKT ALEGVSEEEW KAAAIDAALE VLPEQLDLKK RVVFQSIRVA ECGNMVSPPL
GESMELLGRE VCLARLDRAM ELCK
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