Gene Apar_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0473 
Symbol 
ID8413322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp540015 
End bp540872 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content43% 
IMG OID645022041 
ProductATP-NAD/AcoX kinase 
Protein accessionYP_003179495 
Protein GI257784278 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTAC TTCTTGTTCC AAATTATTCA AGAGAAGTTG CTGTTTCTGG TGCACGTGAA 
CTTGAAGAAT GGCTTTTTAA TCAGGGATGT GATGTCCAGT GGGCACACGA TAAAAAGTTG
TTTCCAGATA AAGATGTAGA CTGCTCTGAT TGTCAGCTTG TTATTTCCCT TGGTGGAGAC
GGAACACTTC TTAGAGCTGC CAGAATTGTT GAGTATTCAG AAATTCCTAT TTTGGGTATT
TCATATGGTC ACCTTGGCTT TTTGACTAGT GCAACTCCCA ATCAAATGAT TGAGATGGTA
GCTGATGCTC TTGCAGGAGA GCTCCATGTT TCTAGAAGAG CAACGCTCGC AATAGAAACA
GAATACGAGC TTCCTTCTGA AGAAACCTAC GTCAAGAAAA CCTTCTCGCT CAATGATTTT
GCTGTTTCCA GAGGTGGGGC TGGTGATATG GTTGAGTTTA CGGTTTCTGT ATCTGGCAAC
CATATTGATA AGCTTCGTGG AGATGGCTTT GTAGTTAGTA CGGCAACAGG ATCAACTGGT
TATGCATTGG CTGCAGGTGG ACCGATTGTT ACACCAGAGT TTTCGGGAAT GGTTTGTGTA
CCAATTGCGC CACATACTAT TCTGGCTCGT GCATTCCTTA CATCTCCTTC TGATGTAGTT
GAAATTACCA TGTCAAAAGA TCGGCCTGCA CCGTGTCATT TCTTTTCTGA TGGACAAAAC
ATCAAGCATC CAGAGGAAGG TGCGGCTACT AAAGCTCGTA TTAGCCGTGG ACCGGGAGAT
ATCATTCTGC TTGATAGGAG CGCTGATAGT TTCTATCGTT CAGTTTCTCG CGTATTTTAC
GGTAAAACTG GTCAGTAA
 
Protein sequence
MKVLLVPNYS REVAVSGARE LEEWLFNQGC DVQWAHDKKL FPDKDVDCSD CQLVISLGGD 
GTLLRAARIV EYSEIPILGI SYGHLGFLTS ATPNQMIEMV ADALAGELHV SRRATLAIET
EYELPSEETY VKKTFSLNDF AVSRGGAGDM VEFTVSVSGN HIDKLRGDGF VVSTATGSTG
YALAAGGPIV TPEFSGMVCV PIAPHTILAR AFLTSPSDVV EITMSKDRPA PCHFFSDGQN
IKHPEEGAAT KARISRGPGD IILLDRSADS FYRSVSRVFY GKTGQ