| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0459 |
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| Symbol | |
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| ID | 8413308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 528756 |
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| End bp | 530111 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022027 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_003179481 |
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| Protein GI | 257784264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTC CATCTAATGA TTCTTCTCCG CGTCGTCAGG GCGCACATTT TTCTTCTTCT
GTATCAGAGG GACAGGCCCA GGAAGAACAG ATACAGGAAA AACAAACTCA ACAAGACTCA
GCGCACTATA ACGCTGGTTC GCAAGAGGCG CTTCAGCAGC CTCCTGTTGA AGCTACGGGA
TCGCTGCCTG CACTTACTGG CGGTAAGCTT TCATCAAGAA GTGCTCAAGT TACGCATAAG
GCAAAAAATA AGCAGGTCAA GCATAGAGAC AGGAAGGCTT CAAAGTGCTC TCGTATTTTT
GCAACGCTTA TCGCTTTTGT TATGGTTGCA GCTCTTGGCA TTTTTGTGTG GAAAGTTGCA
CTTCCAGAGC TTTCTCGCAC TAACTCTGAT ACACAAGAAA TTACCGCTGG TCAGCAAGTT
ACTGTTACCA TTCCAGATGG TGCTGGTGCG CAGGAAGTTG CAAAGATTCT TTTTGAGAAC
AAGATTATTG CTACTAAGAG CGAGTTCTTA GATCAGGTAA AGCGCCAGGA TGCTGAGCAG
AAAATCAAGA GTGGTAGTTA TGTTATTACC ACTGGTACCA AGCCAGCAGA CATCGTACAC
CTTCTTGTTT CTGGTCCAAA TGCCCCTGGC AGTGGCTTCG TCGTACCAGA AGGCTATACC
GTTTCTCAAG TTGCTGATTT GGCTCAGAAC TACTTTGGCA TTTCTCGCGA TGATTTCTTA
AATCAGGCAA AAGCATCCAA TTATGTTGCT GACTATCCGT TCCTTGCCGG TGCGGTAGAT
GCTAACGATT CTCTTGAAGG TTATTTGTTC CCTAAGACGT ATACCTTTAC GGAAAGCAAC
GTAACCGCTG ATACTGTCAT TCGTGCCATG CTTGATCAAT TTAAGGCAGA GACGGCCAAT
CTTAACTTGG ACGCTGCTCG TATTACGCTC AACAAACGTT ACAACTTGAA TCTTACTAAC
GAGCAAATCA TTACCATGGC ATCAATTATT GAGCGAGAAG CTCTGACTGA TGAGGATCGT
CCTAAGGTTG CGTCTGTTTT CTACAACCGC CTGTATGATG ATATGTATCT ACAAAGTGAT
GCAACTCTTG CATATTCCTT GGGTAGAGAA GCTACTGCTG AAGAGTTAAG CTCAATGACA
AGCGATCCGT ATAATACCTA CGCGTTCAAG GGCTTGACCC CTACGCCTAT TTGCTCTCCA
GGTTATGCCT CTATTAAGGC GGCAATGGAT CCAGCAGCAA CCAATTATTA CTACTTCTGG
ATTACCTCAG ATGAACATGT ATTCTCTGAG ACTTATGACG AGCATCAACA GGCTATTGAA
AACGCACGCG AGCGTGAAGC CGCAAGCAAA CAGTAA
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| Protein sequence | MPTPSNDSSP RRQGAHFSSS VSEGQAQEEQ IQEKQTQQDS AHYNAGSQEA LQQPPVEATG
SLPALTGGKL SSRSAQVTHK AKNKQVKHRD RKASKCSRIF ATLIAFVMVA ALGIFVWKVA
LPELSRTNSD TQEITAGQQV TVTIPDGAGA QEVAKILFEN KIIATKSEFL DQVKRQDAEQ
KIKSGSYVIT TGTKPADIVH LLVSGPNAPG SGFVVPEGYT VSQVADLAQN YFGISRDDFL
NQAKASNYVA DYPFLAGAVD ANDSLEGYLF PKTYTFTESN VTADTVIRAM LDQFKAETAN
LNLDAARITL NKRYNLNLTN EQIITMASII EREALTDEDR PKVASVFYNR LYDDMYLQSD
ATLAYSLGRE ATAEELSSMT SDPYNTYAFK GLTPTPICSP GYASIKAAMD PAATNYYYFW
ITSDEHVFSE TYDEHQQAIE NAREREAASK Q
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