| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0381 |
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| Symbol | |
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| ID | 8413230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 442739 |
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| End bp | 443671 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645021949 |
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| Product | Undecaprenyl-diphosphatase |
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| Protein accession | YP_003179403 |
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| Protein GI | 257784186 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
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| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.100133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAGTCAG CAATTTTATG GATTGAAGCG CTTAAATCAG CGTTGTTTGG CGTAGTTGAG
GGTATTACCG AGTGGCTACC TATCTCATCA ACAGGTCATA TGTTGCTGCT TAATCAGTTT
CTACCACTCA ACGTCTCTGA AGATTTTTGG AATATGTTTC TGGTAGTTAT TCAGCTTGGC
GCAATTCTTG CTGTTTGTGT AGGATTCTTC CACAAGCTCA ATCCCTTCTC GCCAAAGAAA
TCTAAGGAAG AGAAGCGTTC TACCTGGAAG CTCTGGGCAA AAGTGGTGGT TAGTTGCGTT
CCTGCTGCAG CGATTGGCCT GCCGCTCAAC GATTTTATTG AAGAGCACCT TGGAAGTCCT
TTTGTTATCG CCGCAACTCT TATCTTTTAC GGCATTATTT TTATTTTGCT TGAGCTACAT
CGCGAGAAGG TCGCCGCAAC GGTAAAGGTT GAGGCACCTC GCGGAAAGCA CATGCGTCCA
GATGCTGGCG CATCCCTTAA GGCTTCTTCT GCCGACGATC TTGCTCGTGT AAAAGATATT
GATAATCTGG ACTGGAAGAC CGCGCTTGGT ATCGGCGTTT TCCAGGTACT TGCAATTGTT
CCAGGTACTT CGAGGTCTGG CGCAACTATT CTTGGCGGTT TGGCGCTTGG TTGCTCTAGA
GCAGTTGCCG CTGAGTTTAC GTTCTTCTTG GCCATTCCAA CTATGGCTGG CGCTTCTGCT
TTAAGGCTTG TGCGCTACTT TATGAAGGGA AATACTTTCA CTACTCCTGA GGCACTTATT
TTGAGTGTTG GTTGCCTAGT TGCCTTTATC GTGTCTCTTA TTATGGTTCG TGCGCTCATG
GGATATGTCC GCAAGCACGA TTTCAAGCCT TTTGGTGTTT ACCGAATTAT CTTGGGTATT
GCTGTGATTG CATATTTTCT GTTGGTTAAG TAG
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| Protein sequence | MESAILWIEA LKSALFGVVE GITEWLPISS TGHMLLLNQF LPLNVSEDFW NMFLVVIQLG
AILAVCVGFF HKLNPFSPKK SKEEKRSTWK LWAKVVVSCV PAAAIGLPLN DFIEEHLGSP
FVIAATLIFY GIIFILLELH REKVAATVKV EAPRGKHMRP DAGASLKASS ADDLARVKDI
DNLDWKTALG IGVFQVLAIV PGTSRSGATI LGGLALGCSR AVAAEFTFFL AIPTMAGASA
LRLVRYFMKG NTFTTPEALI LSVGCLVAFI VSLIMVRALM GYVRKHDFKP FGVYRIILGI
AVIAYFLLVK
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