| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0373 |
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| Symbol | |
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| ID | 8413222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 428482 |
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| End bp | 429954 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021941 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003179395 |
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| Protein GI | 257784178 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCGA ATAAGCTTTT TGCGGAAACA CCACCATTTA AATTATTTAT ACGAGCAGCG
CTCCCAGGCG CCATTGCCAT GCTTGCGTCG ATGCTTTATG ACACTGCAGA CGGAATTCTT
GTTGGACGCT ACTTGGGTCA GGAGTCTTTT GGCGCAGTAA CTATTGCCGT TCCTCTGGTC
ATTCTCTGCT TTGCTATTGC TGACCTTATT GGCGTTGGTG CCTCTGCTGT CATTGCAGTT
GAACATGGCA AAAAGAACCA CCAAACAGCT AATAACATCT TTACCATTGC ATTTATCATG
CTCATCACCA CTGGTGTTAT CAGCGGTATT TTCTTCTTCT TTTTTGCACC AAACGTTCTA
GCGCTTATGG GTGCTCAGGG AAAAATTGCT GAGCAAGGAA CCATCTACCT GCGCGTATGG
ACTCTTTTCT TGCCGGTTAT GTGCATCTCA TACGCCGTTG ATAACTTTCT TAAAATCTGT
GGAAAAATTA GGCGCTCTAC CAGCATTGCC TTTATTTCTG CAATTCTGGG AACCGTGCTT
GAGTACTACT TTCTAGGTGT TTTGGGACTT TCCGTTGAGT ACGCAGCGCT GGGCTACTGT
ATCTCTATTA CCTTCTCATC ACTCTATGGT GTCTGGCCCT TCATTGGCAA CAAACAGATT
CTCAAATTTG TAAAGCCGCA CTTTAACTGG ACACACATAA GAGAGATCTT TGTAAACGGC
TTCCCCATCT TTATGCAGAA CATCTCAAGT AGGATTTATT CTCTGCTCAT GAACGCTGCC
CTGCTCACCC TTGGTGGAGA TATTGCCATT GCTTCTTACG GCGTGCTTCT CTATTCTGGC
GGCCTGATCC AGCCACTTAT TTATGGACAG GCTGATGCCA TGCAACCTGC TGTTGGCTAT
AACTGGGGCG CAAAGAAGAA AAATCGAGTT CTTGCTATCG AGAAGTACAT TTTCTCCACA
GGCATCATCA TTGGCATCTT TGCTTTCTGT GTCTCGTTTT TCTTCTCGGA ATTCTTAGTT
AAGCTATACC TACCTGACGG AACCCAAGAA CTGCTTAATA TAGCTATCCC TGCCATGCGC
ATCCATGCAT TTATCTTCAT TTTTAGCTGG ATTACCATGT GCACCGAGAG CCTTGCTATT
GCCCTGAAGC AAACAAAAAT TTCTAATCTT TTAAGTATCT TCATGGCGCT TATCTTCCCT
ATCAGCTCAC TTCTGATATT GAAGCCTTTT GGCCTAGATG CACTCTGGTA TGTCTCGGTG
GTGTCCAACA TTCTCTCAGC GCTGCTTTCC GTTGGCTGTC TCATCCATAT CTATCGCAAG
TACTTTACAA GTGTAGACAA AGATGACGTA GGTGCTGCAT CTGACGCCAG CCAAGAAGAA
GATGCCGAAC TCACCGATGC AGCACTTGCA ACATCCGAAC TCTCCAGCCC AGAAGATCAC
CTAGATCCCG AGTCCATCTC CCGAGCTCAA TAA
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| Protein sequence | MESNKLFAET PPFKLFIRAA LPGAIAMLAS MLYDTADGIL VGRYLGQESF GAVTIAVPLV
ILCFAIADLI GVGASAVIAV EHGKKNHQTA NNIFTIAFIM LITTGVISGI FFFFFAPNVL
ALMGAQGKIA EQGTIYLRVW TLFLPVMCIS YAVDNFLKIC GKIRRSTSIA FISAILGTVL
EYYFLGVLGL SVEYAALGYC ISITFSSLYG VWPFIGNKQI LKFVKPHFNW THIREIFVNG
FPIFMQNISS RIYSLLMNAA LLTLGGDIAI ASYGVLLYSG GLIQPLIYGQ ADAMQPAVGY
NWGAKKKNRV LAIEKYIFST GIIIGIFAFC VSFFFSEFLV KLYLPDGTQE LLNIAIPAMR
IHAFIFIFSW ITMCTESLAI ALKQTKISNL LSIFMALIFP ISSLLILKPF GLDALWYVSV
VSNILSALLS VGCLIHIYRK YFTSVDKDDV GAASDASQEE DAELTDAALA TSELSSPEDH
LDPESISRAQ
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