| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0348 |
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| Symbol | |
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| ID | 8413197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 397826 |
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| End bp | 398521 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 645021916 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179370 |
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| Protein GI | 257784153 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGGT TTGAGAATGT TTCAAAATCT TTTAAAGATG GCGATAAATA TCACACAATT
TTGAATCGTG CGTCTACGAG TTTTAACGAT GGCCAGAAAA ACTGTATTGT TGGACGTTCT
GGTTTGGGAA AATCAACTGT TCTTAAATTA ATCTCATCAA TTGAGAATGC AGATGAGGGC
TCAATTTATA TAAATGATAT TAATATTTCA ACTGCCTCTC AAGAAGAGAT TCGTAGCATT
CGTCAGCATC TAATAGGCTA CGTATTTCAA TCATTTAACC TTATCAAGTC CTTAACCGTA
GAAGAAAACA TTTTGCTTCC GACATTTTTC CTTGAAAGTC CTAGCGATTT GTTTGACATC
TCATATCTGT TAGATGTTTT GAATTTGCCT TCAAGCATAC TAAAACAGGA TGTCTCTACG
ATTAGTGGAG GCGAAAAACA GAGAGTAGCA ATTGCTCGCG CTCTTATTAA TAAGCCTAGA
ATTCTATTAG CAGATGAGCC GACAGGTAAT CTTGATAGTA ACAATGAGGA AAACGTTCTA
AAGCTGTTTG ACCGAATTAC CAACGAGTTA GATATGACTT TGGTCATTGT GACCCATTCT
TCAAAAGTAG CTGCAAATTG CGACTGTATA GTGACTATTG AAAATGGAGA GTTCCAGCAG
GTAAAAGATA CTTTTAGTCA AAATCAGTTT GTTTGA
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| Protein sequence | MIRFENVSKS FKDGDKYHTI LNRASTSFND GQKNCIVGRS GLGKSTVLKL ISSIENADEG
SIYINDINIS TASQEEIRSI RQHLIGYVFQ SFNLIKSLTV EENILLPTFF LESPSDLFDI
SYLLDVLNLP SSILKQDVST ISGGEKQRVA IARALINKPR ILLADEPTGN LDSNNEENVL
KLFDRITNEL DMTLVIVTHS SKVAANCDCI VTIENGEFQQ VKDTFSQNQF V
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