| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0345 |
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| Symbol | |
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| ID | 8413194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 394466 |
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| End bp | 395509 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645021913 |
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| Product | Polyprenyl synthetase |
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| Protein accession | YP_003179367 |
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| Protein GI | 257784150 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTTCG CCGACTATCT CAAACAAAAA CTCCCTGCTG TTGAGGCGGA AATTATGCGC
GGACTTCCCG CGGCATCCAC CTCACCGGCT AATGCCAGCT CAGAGCGTAC CCACGCGGAC
TTGAACACCT ACCTCTACCA GCCACTCGCT CACTTTAGTG CAGGCGGCGG CAAGCGCGTA
CGTCCGGTTC TGTGCTGCCT AGGCGCCGAG GCAGTTGGCG GATCAGCAGA AGCTGCTCTG
CCTGTGGGCT GCGCCATCGA GGACTTCCAG TCGGCAGCTC TTATCCACGA TGACATTGCA
GACAAATCAG AGCTGCGCCG TGGCGAGAAA TGCCTCTACA AGACACTTGG CACCGGACTT
GCCATTAATG TTGGTGATTC TGCCCTGGTA AATGTTGTCA GACGCGTTAC CGTAGCCGAC
CACCTCTCTG ACCAGATTAA AGTTCGCGTT ATCGACGCTC TTCTCAGCAT GGAAGAGCAT
ACTCTTGAAG GCCAGGCACT TGACCTTGGC TGGGCTCAAA ACGAGCGCTG GGATGTTACC
TCTGACCAGT ATCTTTTTAT GGCACTCTCT AAGACTGCCT ATTACTCTGC TGCATATCCC
TTGGTATTGG GTGCACTTAT TGGTGGCGCT GACCAGAAAA CACTTGACGC ACTCAAAGAT
TTTGGCCTTA AGGTTGGCCT TGCCTTTCAG CTACAAGACG ATCTTCTCAA CCTGGTAGGA
GACGCCAAGG AACAAGGTAA AGACTTTAGG TCGGACATTA CTGAAGGCAA GCGCACTCTT
GCTGTGGTCT ACGCACTTGA ACATCTTGGC TCAGCAGATA AGGCCGAGCT TGTCTCCATA
CTTTCTGCGC ATACTACCGA TACTTTGAGG CTTCAGCATG CTGTGGAACT CATGGAAAGC
GTTAATGCGA TAAAATTTGT CCGCACGCGC GCTCTTGCCT TAGTTGAAGA AGCAAAGCTT
GTGCTTAAAA ATGTGATACT TACTGAAGAC GCTCGCGACA CACTTTTGTC TATGGCAGAC
TTCTTTGTGA ACCGAGAAAG GTAA
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| Protein sequence | MNFADYLKQK LPAVEAEIMR GLPAASTSPA NASSERTHAD LNTYLYQPLA HFSAGGGKRV
RPVLCCLGAE AVGGSAEAAL PVGCAIEDFQ SAALIHDDIA DKSELRRGEK CLYKTLGTGL
AINVGDSALV NVVRRVTVAD HLSDQIKVRV IDALLSMEEH TLEGQALDLG WAQNERWDVT
SDQYLFMALS KTAYYSAAYP LVLGALIGGA DQKTLDALKD FGLKVGLAFQ LQDDLLNLVG
DAKEQGKDFR SDITEGKRTL AVVYALEHLG SADKAELVSI LSAHTTDTLR LQHAVELMES
VNAIKFVRTR ALALVEEAKL VLKNVILTED ARDTLLSMAD FFVNRER
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