| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0333 |
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| Symbol | |
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| ID | 8413181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 380810 |
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| End bp | 381739 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021900 |
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| Product | Transketolase domain protein |
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| Protein accession | YP_003179355 |
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| Protein GI | 257784138 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACAT CTGCATTACC CGAGCGCAAT CTCACTGATG ACGAGCTCAA GTTAGCGGCT
AATACGCTAA GACGTGATGT TATTGACATG CTTGAGAAGA GTAAGTCAGG ACATCCCGGC
GGCTCACTGA GTGCGGCAGA TATTGTGGCT ACACTGTTTT TCTCGGGAGT GATGAAGTAC
AACCACAATA ACCCAGAGGA CCACACCGAG GACAGATTCT TCCTGTCTAA GGGTCACGTA
GCTCCTGTGT TGTATGCTGC GTACCACTTG CTTGACTGGC TTCATGACGA GGATATGGTT
ACCCTTCGCC AGCTTGGCAG TCGCTTGCAG GGTCATCCAG ACTGTCACGC ATGTCCTGGC
ATTGAAGTTT GCTCCGGTTC TCTTGGCCAA GGACTCTCAG TAGCCGCAGG ATGTGCTCTG
GGTCTTTCTA TGGACGCTCT GGCAAGCGGC GAGCGTGCCA AGAAGGTTTT TGTCCTTCTG
GGCGACGGCG AGCTGCAGGA GGGCTCTAAC TGGGAGGCAT GCATGTTTGC TGCTCACCAG
AAGCTGGATA ATCTCATTGC CATTGTGGAC CTCAACAACT TGCAGATTGA CGGCCACGTA
ACCGACGTGT GCTCTCTTGG TGATATTGAC GAGAAGTTCC GTTCCTTTGG CTGGAACGTG
CTGCGCGTTA ACGGTCACGA GGTCGTCTCG GTGCGCAAGG CCCTTCTCAC CGCACGAGAT
GGTCGCGAAG CAGGAAATAC CGCACCTACT GTGGTTATTT GCCAGACTGT CAAAGGCAAG
GGTGTTTCGT TTATGGAAGA CAAGGCTTCC TGGCACGGAA ACGCTCCTTC GGCAGGTCAA
GCTGACATTG CGCGAGAAGA ACTTGATGCA GCAAGAGAGC TTCTTTTGAT TGATCTTCAG
GGTGAAGGTA AGGAGGTTGC CAATGTCTAG
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| Protein sequence | MGTSALPERN LTDDELKLAA NTLRRDVIDM LEKSKSGHPG GSLSAADIVA TLFFSGVMKY
NHNNPEDHTE DRFFLSKGHV APVLYAAYHL LDWLHDEDMV TLRQLGSRLQ GHPDCHACPG
IEVCSGSLGQ GLSVAAGCAL GLSMDALASG ERAKKVFVLL GDGELQEGSN WEACMFAAHQ
KLDNLIAIVD LNNLQIDGHV TDVCSLGDID EKFRSFGWNV LRVNGHEVVS VRKALLTARD
GREAGNTAPT VVICQTVKGK GVSFMEDKAS WHGNAPSAGQ ADIAREELDA ARELLLIDLQ
GEGKEVANV
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