Gene Apar_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0329 
Symbol 
ID8413177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp377127 
End bp378245 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content49% 
IMG OID645021896 
Productputative L-ascorbate 6-phosphate lactonase 
Protein accessionYP_003179351 
Protein GI257784134 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATT TGAAAGACGT CACACGCGAC AGTTGGATTA TGAGTACCTT CCCTGAGTGG 
GGAACGTGGC TTAACGAAGA GATTGATAAT GCCGTAGTAG AGCCAGGCCA GGTTGAAATG
TGGTGGCTCG GCTGCGTTGG TATTTGGTTT AAGACTCCTG GTGGAGCAAA CGTTGCTGTT
GATTTCTGGG CAGGCAATGG TAAGCGTACT CACGGTGACG GTCTCATGAA GCCTGGTCAC
CAGATGGCAA ACATGGCGGG CGTTCGTAAG ATGCAGCCAA ATCTTCGTAA CGTTCCATTT
GTTATTGATC CATTTGCTAT CAAGAACCTT GACGCTGTTG TGGTAACTCA CATTCACCAG
GATCACATGT CCAAGGAGCT TGCAGCTCAT GTTGTTAACA ACAACATGAC TACCACTGAC
GAGAATGGCA AAGAGATTCC TGTTCCATTT ATTGGTCCTA AGGATGCAGT TGACATTTGG
GTTGGCTGGG GTGTTCCACG CGAGCAGTGT ATTGTTGTTA AGCCTGGTGA CCGTGTCAAG
ATTAAGGACA TGGAGATCGT TGCATACGAT TCCTTTGACC GCACTATCAT TGTTACCACT
ACTGATACTT CTGAGAACCG CCCTGACCTC TGGGGTAAGT GCCCAATGGA CATGGATGAA
AAGGCAGTTA ACTATCTCTT TGTCACCCCT GGTGGAAACA TCTATCACTC TGGTGACTCT
CACTACTCCA TTTACTTTGC TAAGCACGGC AAAGACATCG CTAAGGAGTT TGGTGGCGTA
GACGTCTGCT TTGGCGCTTA TGGTTGCAAC CCAATTGGTA TCCAGGACAA GATGGAAGCA
ACCGATATGC TCCGCATGGC TGAGGCCCTT CAGTCCAAGG TTGTTATCCC AATTCATCAC
GATGTTTGGA CAAACTTCCA GGCAGACGTC CAGGAGATCA AGGTTCTTTG GGACATGCGC
AAGGATCGTC TTGACTACAA GTTCCACCCA TTCTTCTGGG AGGTTGGCGG CCACTACACC
TATCCACAGG ATAAGGACCG CTTTGCTTAC CATCATGACC GTGGCTTCCA TGATTGCTTC
GATCACGAGC CAAACGTTCC ATTCCGCAGT GTTCTCTAA
 
Protein sequence
MADLKDVTRD SWIMSTFPEW GTWLNEEIDN AVVEPGQVEM WWLGCVGIWF KTPGGANVAV 
DFWAGNGKRT HGDGLMKPGH QMANMAGVRK MQPNLRNVPF VIDPFAIKNL DAVVVTHIHQ
DHMSKELAAH VVNNNMTTTD ENGKEIPVPF IGPKDAVDIW VGWGVPREQC IVVKPGDRVK
IKDMEIVAYD SFDRTIIVTT TDTSENRPDL WGKCPMDMDE KAVNYLFVTP GGNIYHSGDS
HYSIYFAKHG KDIAKEFGGV DVCFGAYGCN PIGIQDKMEA TDMLRMAEAL QSKVVIPIHH
DVWTNFQADV QEIKVLWDMR KDRLDYKFHP FFWEVGGHYT YPQDKDRFAY HHDRGFHDCF
DHEPNVPFRS VL