Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0329 |
Symbol | |
ID | 8413177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 377127 |
End bp | 378245 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645021896 |
Product | putative L-ascorbate 6-phosphate lactonase |
Protein accession | YP_003179351 |
Protein GI | 257784134 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATT TGAAAGACGT CACACGCGAC AGTTGGATTA TGAGTACCTT CCCTGAGTGG GGAACGTGGC TTAACGAAGA GATTGATAAT GCCGTAGTAG AGCCAGGCCA GGTTGAAATG TGGTGGCTCG GCTGCGTTGG TATTTGGTTT AAGACTCCTG GTGGAGCAAA CGTTGCTGTT GATTTCTGGG CAGGCAATGG TAAGCGTACT CACGGTGACG GTCTCATGAA GCCTGGTCAC CAGATGGCAA ACATGGCGGG CGTTCGTAAG ATGCAGCCAA ATCTTCGTAA CGTTCCATTT GTTATTGATC CATTTGCTAT CAAGAACCTT GACGCTGTTG TGGTAACTCA CATTCACCAG GATCACATGT CCAAGGAGCT TGCAGCTCAT GTTGTTAACA ACAACATGAC TACCACTGAC GAGAATGGCA AAGAGATTCC TGTTCCATTT ATTGGTCCTA AGGATGCAGT TGACATTTGG GTTGGCTGGG GTGTTCCACG CGAGCAGTGT ATTGTTGTTA AGCCTGGTGA CCGTGTCAAG ATTAAGGACA TGGAGATCGT TGCATACGAT TCCTTTGACC GCACTATCAT TGTTACCACT ACTGATACTT CTGAGAACCG CCCTGACCTC TGGGGTAAGT GCCCAATGGA CATGGATGAA AAGGCAGTTA ACTATCTCTT TGTCACCCCT GGTGGAAACA TCTATCACTC TGGTGACTCT CACTACTCCA TTTACTTTGC TAAGCACGGC AAAGACATCG CTAAGGAGTT TGGTGGCGTA GACGTCTGCT TTGGCGCTTA TGGTTGCAAC CCAATTGGTA TCCAGGACAA GATGGAAGCA ACCGATATGC TCCGCATGGC TGAGGCCCTT CAGTCCAAGG TTGTTATCCC AATTCATCAC GATGTTTGGA CAAACTTCCA GGCAGACGTC CAGGAGATCA AGGTTCTTTG GGACATGCGC AAGGATCGTC TTGACTACAA GTTCCACCCA TTCTTCTGGG AGGTTGGCGG CCACTACACC TATCCACAGG ATAAGGACCG CTTTGCTTAC CATCATGACC GTGGCTTCCA TGATTGCTTC GATCACGAGC CAAACGTTCC ATTCCGCAGT GTTCTCTAA
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Protein sequence | MADLKDVTRD SWIMSTFPEW GTWLNEEIDN AVVEPGQVEM WWLGCVGIWF KTPGGANVAV DFWAGNGKRT HGDGLMKPGH QMANMAGVRK MQPNLRNVPF VIDPFAIKNL DAVVVTHIHQ DHMSKELAAH VVNNNMTTTD ENGKEIPVPF IGPKDAVDIW VGWGVPREQC IVVKPGDRVK IKDMEIVAYD SFDRTIIVTT TDTSENRPDL WGKCPMDMDE KAVNYLFVTP GGNIYHSGDS HYSIYFAKHG KDIAKEFGGV DVCFGAYGCN PIGIQDKMEA TDMLRMAEAL QSKVVIPIHH DVWTNFQADV QEIKVLWDMR KDRLDYKFHP FFWEVGGHYT YPQDKDRFAY HHDRGFHDCF DHEPNVPFRS VL
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