| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0323 |
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| Symbol | |
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| ID | 8413171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 370591 |
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| End bp | 371388 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645021890 |
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| Product | protein of unknown function DUF28 |
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| Protein accession | YP_003179345 |
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| Protein GI | 257784128 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0125354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGAC ACTCTAAGTG GGCCACAACT AAGCACAAGA AAGCAGCTAT TGACGCTAAG
CGTTCTTCGC TGTTCTCTAA GCTTTCCCGC AACATTACTG TTGCTGCAAA AATGGGTGGC
GACCCAAATC CGGACAACAA CGCTAGCTTG TCTGCCGCTG TTGCCCGTGC TCGCATGGTT
TCCATGCCTA ACGCAAAGAT TCAGGCCGCT ATTGATAAGG CATTTGGTGC TGGTGCTGAT
GCTGCCGTTT ACGAGGAGAT TGTTTACGAG GGATACGGTC CTGCAGGCGT CGCAGTTTAC
GTTGATTGCC TGACCGATAA TAAGAACCGT ACCGCAGCAG ACGTTCGCTC CGCATTTACC
CACTCTGGCG GCAACCTTGG TACCGCTGGT TCCGTTGCGT TCCAGTTTGA GCGCAAGGGT
TCCATTGCAG TTGACAAGGT CATTGTCTCC GAGGATAAGA AGGTTGCTGA CCGCGAGAAC
GCTGTCGATG AGGACGAGTT CATGATGGCA GTTGCTGAGG CTGGCGGAAA CGATTACGAG
GATGCTGGTG ATCAGTGGAT TGTTTGGACT GCATATGACA AGATGCAGGA CGTCCAGAAG
GGTCTTGAGG CTCAGGGCAT TGAGGTTAAG GGTTCCGAGC TCACCATGGT TCCTACTACC
CCAACTGATG TTTCTGTTTC TGATGCAAAG AAGGTTCAGC GCCTTATCGA TAAGCTTGAC
GAGCTTGATG ACGTCCAGAA CGTCTATAGC ACTATGAACA TTACTGACGA GATTGCTGCT
GCTCTTGAGG AAGAGTAA
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| Protein sequence | MSGHSKWATT KHKKAAIDAK RSSLFSKLSR NITVAAKMGG DPNPDNNASL SAAVARARMV
SMPNAKIQAA IDKAFGAGAD AAVYEEIVYE GYGPAGVAVY VDCLTDNKNR TAADVRSAFT
HSGGNLGTAG SVAFQFERKG SIAVDKVIVS EDKKVADREN AVDEDEFMMA VAEAGGNDYE
DAGDQWIVWT AYDKMQDVQK GLEAQGIEVK GSELTMVPTT PTDVSVSDAK KVQRLIDKLD
ELDDVQNVYS TMNITDEIAA ALEEE
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