| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0308 |
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| Symbol | |
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| ID | 8413156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 355311 |
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| End bp | 355751 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021875 |
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| Product | protein of unknown function UPF0099 |
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| Protein accession | YP_003179330 |
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| Protein GI | 257784113 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1990] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00283] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00118804 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.388364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGAGCT CTTCATATAA ATCAAAACAA ATGATTGTCA TTCGTCGCGA TCTCAAGATG
CGTAAAGGAA AAATTGCTGC CCAGGCAAGC CATGCGTGTG TTGAAGCTAC GCTAATGGCG
CTTGCAAAAG AGCATCGACT TAATCAAGTT CGTGTCGCAG ATGATCAGAA TTGGGTCTAT
TTAGACCATG CTGATGAAGA TACCTCTGCA ATCACCAACT GGTTTGATGC TGGTGTAGCA
AAGGTATGTG TTTACGTTGA TTCTGAAGAA GAGTTGCTTG AGCTTGCCGC TGAAGGAAAA
GCTCGTGGTT TTGTAGTGGC TCTTATTAGA GATGCTGGCT TTACCGAGTT CCATGGAGAG
CCAACGTTTA CCTGTCTTGC TTTTGAACCG CTTGCTGCAG AAGATATTGA TCCGTTAACT
GGCGAGTTAC CCCTGTACTA G
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| Protein sequence | MPSSSYKSKQ MIVIRRDLKM RKGKIAAQAS HACVEATLMA LAKEHRLNQV RVADDQNWVY
LDHADEDTSA ITNWFDAGVA KVCVYVDSEE ELLELAAEGK ARGFVVALIR DAGFTEFHGE
PTFTCLAFEP LAAEDIDPLT GELPLY
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