| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0302 |
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| Symbol | |
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| ID | 8413150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 349598 |
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| End bp | 350503 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645021869 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_003179324 |
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| Protein GI | 257784107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.271301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACG CCACGTTTAA GCCTACCGTG CTCTACTTAA TTGCACTTAT TATCTGCGGT
TCTAACGGAA TCGTTGCAAG CCTTATTAAC CTTCCAAGCT ATCAAATTGT CTTCTTTCGC
ATGCTCTTAG GCACGCTCTT TTTGCTTACT GTTAAGTTTG TACAAAAAGA AGCTTTCACC
ATACAAAAGT ATCCTAAAGA CTTCCAAGCG CTTATTGGAT CGGGCATTGC CTTAGGACTT
CAGTGGACTT TTCTTTTTGA AGCATACCAA CTGGTAGGCG TTGGTATTGC AACGCTTGAG
TACTACTGTG GTCCCGTCAT TGTAATGGCA CTGACTCCGT TTTTATTTGG CGAGAAATTC
ACTACTAAAA AAATACTTGG CTTCCTTGTA GTTGTAATTG GAGCTGCTTT AATTATTGGC
TATGGAGTTG GACTGAACCT CTCGCCCACT GGCCTTCTTT TAGGCGCTCT ATCTGCTGTT
TTATATGCCA TTATGGTGAT TTGTAACAGG CAGCTCAAAA ATGTTTCTGG TATTGAAGGC
ACCAGCATTC AACTGGGCAT TGGCTGCGCC GTTGTTGCTC TGGTTACCAT TGTGTTCCAT
AGCATTGAGT TGCCTGCAGA TCCAGCGTCA GTAAATTGGC TAGCCGTTCT GACCATCGGT
CTCTTCAACA CAGGCCTTGG ATCATTCTTG TATTTCCCAC AACTTACCAA AATTCCTGTT
CAACGTGTAG CAGTTTTTGG TTATCTTGAA CCACTATCTG CTGTTATCTT CTCAGCACTT
ATCCTTGGCG AGCCTTTTGG TCTTCTTAAA ATAATAGGCA CCGCCTGTAT CATAGGCGGT
GCCATCTTTG CTGAGTTATC AGGCGCCTCT TCTAACAAAT CAGAGGCTAT TGAAACTCCA
CTTTAA
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| Protein sequence | MKDATFKPTV LYLIALIICG SNGIVASLIN LPSYQIVFFR MLLGTLFLLT VKFVQKEAFT
IQKYPKDFQA LIGSGIALGL QWTFLFEAYQ LVGVGIATLE YYCGPVIVMA LTPFLFGEKF
TTKKILGFLV VVIGAALIIG YGVGLNLSPT GLLLGALSAV LYAIMVICNR QLKNVSGIEG
TSIQLGIGCA VVALVTIVFH SIELPADPAS VNWLAVLTIG LFNTGLGSFL YFPQLTKIPV
QRVAVFGYLE PLSAVIFSAL ILGEPFGLLK IIGTACIIGG AIFAELSGAS SNKSEAIETP
L
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