| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0300 |
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| Symbol | |
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| ID | 8413148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 347220 |
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| End bp | 348899 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645021867 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_003179322 |
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| Protein GI | 257784105 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.208774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGT TTGTCTATCA GATGTACAAA GCTCGTAAAG CAGTTGGCGA GAAGGTCATT
CTTGATGACG TTACTGTAGG CGTATATCCA GGTGCAAAAA TTGGCGTTGT TGGTCCAAAC
GGCATGGGTA AGTCCACGCT GCTCAAAGTT ATTGCGGGCT TAGAGGATGT CTCTAACGGT
GAAGCTAAGC TAACTCCAGG CTATACTGTT GGTCTACTTC AGCAGGAGCC ACCTCTAGAT
GAGACTAAAA CGGTCAAGGA AAACATTGAG CTTGCCTTTG GTGACCTGCT TTCCAAGATT
GCACGCTTCA ATGAAATTGG CGTTGAGATG GGTAATCCAG ATGCCGATTT TGATGCGCTT
ATGGCAGAGA TGGGTCAGCT TCAGACCGAG ATTGACGCAG CTAATGGCTG GGATTTGGAC
AGTCAGCTCT CCCAGGCAAT GGATGCCCTT CAGTGCCCAG ACCCAGACTC TCCTGTTACT
CATCTTTCTG GTGGCGAGAA ACGCCGTGTA GCCCTGTGTC GCCTGCTACT TGAGGCACCT
GATCTGCTTC TTTTGGATGA GCCTACCAAC CACCTCGATG CTGAGTCAGT GCTCTGGCTT
GAGAAATTCC TGCATGATTA TCCTGGTGCT GTTATGGCCG TAACACATGA CCGCTACTTC
CTCGATGATG TTGCTGAGTG GATCTGCGAG GTTGACCGTG GACAGCTGTA TCCTTACGAG
GGCAATTACT CAACCTATCT GGAGAATAAG GCAGCACGTC TTGAGGCTCA GAATCAGCAG
GATGCCAAGC GTGCAAAGAA AATGCGTGCT GAGCTGGAGT GGGTTCGTTC TTCTCCCAAA
GCTCGTCAGG CAAAGAACCG CGCTCGTCTT GATCGCTATG AGCAGATGGA AGCAGAAGCT
CGCGCATCCA AGAAGCTTGA TTTTACCGAG ATTCAAATTC CTGTGGGGCC ACGCTTGGGC
CAGAAGATCC TAGAGGCTAG TCACATTCAC AAAGCTTTTG GGGATCGCGT TCTTATCGAT
GACCTTTCGT TTAGCTTGCC AAGAAACGGC ATTGTTGGCG TAATTGGTCC CAATGGTGTT
GGTAAGTCCA CACTGTTCAA GGCTATTGTT GGTCAGGAAG AGCTCACTTC TGGCACTCTT
GAGATTGGCG AGACAGTTCA AATTTCTTAT GTTGACCAGC TCAGACAAGG AATTGACCCA
GAAAAAACTA TCTGGGAGGT TGTTTCTGAC GGAAACGATT TCATTAAGGT GGGAGATACT
GAGATTCCAA GTCGTGCTTA TGTGGCTAGC TTTGGTTTCA AGGGACCTGA TCAGCAGAAA
CGCGCTGGCG TTCTTTCTGG TGGCGAGAGA AACCGTCTAA ACCTTGCTCT TACGCTTAAG
CAAGGAGGAA ATCTTCTGCT TCTGGACGAA CCTACTAACG ACCTTGATAT TGAGACGCTG
GAAAGCCTTG AGGATGCACT TGAGCGCTTC CCGGGATGTT CTGTGGTAAC CAGTCACGAC
CGTTGGTTCT TGGACCGTAT TGCTACACAT ATTCTTGCGT GGGAAGGCGA TGATGAGAAT
CCAGGTAAGT GGTTCTGGTT TGAGGGAAAC TTTGAGGCTT ATCAGGCTAA TCGTATTGAA
CGACTTGGTC AGGAGGCTGC TCGTCCTCAT CGTATTCATC GTAAACTTAC ACGCGACTAA
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| Protein sequence | MAEFVYQMYK ARKAVGEKVI LDDVTVGVYP GAKIGVVGPN GMGKSTLLKV IAGLEDVSNG
EAKLTPGYTV GLLQQEPPLD ETKTVKENIE LAFGDLLSKI ARFNEIGVEM GNPDADFDAL
MAEMGQLQTE IDAANGWDLD SQLSQAMDAL QCPDPDSPVT HLSGGEKRRV ALCRLLLEAP
DLLLLDEPTN HLDAESVLWL EKFLHDYPGA VMAVTHDRYF LDDVAEWICE VDRGQLYPYE
GNYSTYLENK AARLEAQNQQ DAKRAKKMRA ELEWVRSSPK ARQAKNRARL DRYEQMEAEA
RASKKLDFTE IQIPVGPRLG QKILEASHIH KAFGDRVLID DLSFSLPRNG IVGVIGPNGV
GKSTLFKAIV GQEELTSGTL EIGETVQISY VDQLRQGIDP EKTIWEVVSD GNDFIKVGDT
EIPSRAYVAS FGFKGPDQQK RAGVLSGGER NRLNLALTLK QGGNLLLLDE PTNDLDIETL
ESLEDALERF PGCSVVTSHD RWFLDRIATH ILAWEGDDEN PGKWFWFEGN FEAYQANRIE
RLGQEAARPH RIHRKLTRD
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