| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0260 |
|---|
| Symbol | |
|---|
| ID | 8413108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 299870 |
|---|
| End bp | 300904 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645021827 |
|---|
| Product | molybdopterin binding domain protein |
|---|
| Protein accession | YP_003179282 |
|---|
| Protein GI | 257784065 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0303] Molybdopterin biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.501358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.241129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA TTAGAACAGA AGATGCAGTA GGACATGTAC TGTGTCACGA TATGACTCAG
ATTATTCCTG GCGAGAGCGC TGACGACAAG ACGCGCTTTA AGGGCGTGCG CTTTAAGAAG
GGTCACGTAG TAGAAAAGGC TGATATTCCT GTATTGCTCA GCATGGGTAA AGAGCATCTT
TATGTGTGGG AGTTGGGAGA CAACCAACTT CATGAAAACG ATGCGGCATA TCGCATGGCA
GCGCTTTGCC ATGGCGAGAA TTGCCTTGTA TCCAAAGAGC CTCATGAGGG AAAGCTCACT
ATCACTGCGG CAGTTGACGG TGTCTTTGAG CTTGATGTCC AGCGTCTTAA TGCAGTGAAT
GCAGTAGATG AAGTTATGAT TGCTACTCGT CGCGGCAATA TTGCAGTTAA GAAGGAAACC
CCTCTTGCGG GAACTCGTGT TATTCCTTTG GTAGTAGATA CGTCTGTTGT TGAGGCTGCC
GAGGCTGCTG CTGATGTTGA GCATAAGGGA GCTCTTATGC GAGTAGTACC GTTTTGCGTT
AAGACTGCGG CGCTTATCGC AACAGGGTCT GAAGTGCAAA AGGGACTTAT TGAGGATAAG
TTTACACCGG TAGTTGAGAA AAAACTTGCA GCTTTTGGCA TTGAAACAGT GCATTGTGCA
AAGCCTGGCG ATGATATGGA TGCACTTGTT GCTGCTATTC GCAAAGCACA ACATTTGGGT
GTAGACATGA TTGTCTGTAC AGGTGGAATG AGCGTAGACC CAGATGATAA TACCCCAGGT
GCTATCAAGC GCTCCGGTGC TCATATTGTT ACCTATGGTG CTCCGGTTCT ACCTGGTGCA
ATGATGTGTT TAGGATATTT GGATGCAGCC AATAGTTCTA CTTCTCAAAT TCCTATCTTA
GGACTTCCGG GATGTGTCAT GTATAGCGCA ACAACAGTAT TTGACTTAGT TCTTCCCCGT
ATTGCGGCTG GTATTGAACT GACAAAGCAT GATTTTGTAG CCCTTGGCGA GGGTGGCCTC
ATAGTAAAGG AATAA
|
|---|
| Protein sequence | MKQIRTEDAV GHVLCHDMTQ IIPGESADDK TRFKGVRFKK GHVVEKADIP VLLSMGKEHL
YVWELGDNQL HENDAAYRMA ALCHGENCLV SKEPHEGKLT ITAAVDGVFE LDVQRLNAVN
AVDEVMIATR RGNIAVKKET PLAGTRVIPL VVDTSVVEAA EAAADVEHKG ALMRVVPFCV
KTAALIATGS EVQKGLIEDK FTPVVEKKLA AFGIETVHCA KPGDDMDALV AAIRKAQHLG
VDMIVCTGGM SVDPDDNTPG AIKRSGAHIV TYGAPVLPGA MMCLGYLDAA NSSTSQIPIL
GLPGCVMYSA TTVFDLVLPR IAAGIELTKH DFVALGEGGL IVKE
|
|---|
| |