| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0253 |
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| Symbol | |
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| ID | 8413101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 294157 |
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| End bp | 295170 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645021820 |
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| Product | protein of unknown function DUF182 |
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| Protein accession | YP_003179275 |
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| Protein GI | 257784058 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0507983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATT TACAAGGAAC CTTGTGCGAT GAGCATTTTG TGCGTCGTCT GCTAAGTGAA
CTTGAAGCCG GTCGCAGCTT TGTGCTTTCA ACAATTTTTG CTACTAAGGG GTCCATGCCG
CGCCATGCAG GGGCACGTAT GGTGCATTTT GAAGATGGCA GTTTCTTAGG AACAATCGGA
GGCGGTTCTG TAGAACTTAT TGCACAGGAA CGCTCAAAAG GATTCTTTAC AGGAGAAGAA
AACAATCAAA TCGAGTGGAT GACGCGAGAA AAAACAGGTA TGGCCTGTGG CGGCGACGCA
CTTGTTGGTA TTCGTAAGGT TACTCCTGAT CAAAAGGATT TTTTTGCAAA AGATTTAATG
AATCTTATTG ATGCAAAAAA GCCTTTTGTG GTTATAGAAA ATTGGTCAGA TCCTAGTCAT
GTTCTTGTTG AAGCAAAAGC AGTTGATATG TTTCCTCAAG ATGATATTCG CGTTTGTTCC
GATGTTCCCA TATGGGATGA AGAGGCGGCA ACCTATTCTG AACCTTTAGG GCCGGAGCCT
GTTGCTTACA TCTTTGGCGG CGGCCATGTA GGTCGTGCCC TGACTCCTGT ACTTGCAAGT
GTAGGTTTTA GAGTGATTGT GCTTGATGAC CGCGAGGGAG TTGCGCAGAA GAAAGATTTT
CCTTCAGCAG AAGCGGTTTA TCATAATGAC TTTTCTGATA TATCCACAGA TGTCACTGTC
ACGCGTCGCG ATTATGCGAT AGTTACTACT CATGGCCATG CCTTTGATAT TAAGGTGTTG
CAACAACTGT ATAGCTATAA ACCTGCGTAT GTAGGTTGTA TTGGTAGCAA GAGAAAAGCG
GCGTTTGCCA AACATACGCT GGTGGAACGC GGTGTTTCTA AAGGGTGGAC TCAAACAATC
CATTCGCCAA TTGGTGATGA CATTAAAGCA ATTACACCGT CTGAAATTGC TATTTCTATT
GCGGCGGAGA TAATCCGTTG TCGTGCAAAT TTCCGTCCAG AAAAACTTCA TTAG
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| Protein sequence | MADLQGTLCD EHFVRRLLSE LEAGRSFVLS TIFATKGSMP RHAGARMVHF EDGSFLGTIG
GGSVELIAQE RSKGFFTGEE NNQIEWMTRE KTGMACGGDA LVGIRKVTPD QKDFFAKDLM
NLIDAKKPFV VIENWSDPSH VLVEAKAVDM FPQDDIRVCS DVPIWDEEAA TYSEPLGPEP
VAYIFGGGHV GRALTPVLAS VGFRVIVLDD REGVAQKKDF PSAEAVYHND FSDISTDVTV
TRRDYAIVTT HGHAFDIKVL QQLYSYKPAY VGCIGSKRKA AFAKHTLVER GVSKGWTQTI
HSPIGDDIKA ITPSEIAISI AAEIIRCRAN FRPEKLH
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